Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00873 ATGGGCCCTGCAGAAATTGTGGATTTATCCAGTGATGATGAAAGTGAAACAGTTTGTTTGAAAGCTGTTAAGTTGGAGGGAGATTTTGTTACGGATAAGAGATATCAAAGTCATACTACTCGACAAGATTCTGAAGAAAATCTAAGTTCTACTGGTCCAAGTACAGGTCATAGTAACTCCAGTGTATTGGAGCAGGGACCATCGCCAGTTGATGACACAGGCATTTCTTATGTGTCACCCATTGGTGCAGCACCCTTGTGCAGGCAGTTTTGGAAAGCTGGAAACTATGATGATAGGATTGGTTCTAAAGTCACAGTCCAAAATGCTAAAAGTTATCTACACGTGCACCCCATGTTCCTTCACTCAAATGCAACTTCCCATAAGTGGGCATTTGGTGCCATAGCGGAGCTTCTTGATAATGCAGTTGATGAGCGTACTAAGCTATTGTCTATGCCTGGTGATATAATCCAAAGTGGGGCTACCTTTGTCATTGTAGATAAAACTTCAAATCCAAGGGATGGGAGTCCAGCGTTGTTGATTCAAGATGATGGTGGTGGAATGGATCCAGAGGCAATGCGTCGTTGCATGAGTTTTGGATTTTCAGATAAGAAGTCACAGTTTGCTATTGGACAGTATGGAAATGGCGTCAAGACCAGTACTATGAGGCTTGGTGCAGATGCCATAGTCTTCAGTTGCCATCTAAATAATAGGATTTTGACTCAAAGCATTGGACTTCTGTCATATACGTATTTGACACAAACACAGCTTGACAGAATTGTAGTGCCCATGGTGAATTATGAATTTGATACATTCACTGAATCATTGAAAGTATTAAATGGAAATGAGCATTTTATGTCTAATTTATCCTTGCTGTTGCGCTGGTCACCATATTCATCAGAGGCAGATCTGCTGAAACAATTTGATGACATTGGACCTCATGGTACTAAAGTTATTATCTACAATTTGTGGTGCAATGATGATGGGAGTTTGGAGCTAGACTTTGATACAGATTCTAAGGATATTCGTATTGCAGGGGATATCAAGCGTATTGATACACTTAAAGCCTGGAAGAGTATAAATGAGAATCACATCGCTAATCAGTTTCGTTACTCATTACGTGTATATTTGTCCATATTGTACTTGAAGATCCCAGCACGTTTTCAAATTATGTTGCGAGGGAAAGTTGTGAAGCTGCACAACATTGCTGATGATCTTAAATATCCTCAATTTGTTAAATATGCACCACTTATTGACGGATCTGCAACGGGAACAGCTTTGACAGTCACAACAATCGGGTTTCTTAAGGAAGCTCCTCAAGTCAATATCCACGGTTTTAATGTATATCACAAAAATCGGCTTATACTGTTAAGCTGGAATGAGAGAGAATCAGTGTCAAGAACACTGGCAAGGGAGCTTAAAGGGAAGAAGGGCCAGCAAGTGCTGAGCAAAGAAATCTCCATTTTGGCAGGTTGTATCCTGCAGGCAGATTTTATTGAGCCAACACATAACAAACAAGATTTTGAGAGAACTTCCTTGTTTCAAAAGCTTGAAGTGCGATTGAAGCAGATGACATGGGAATACTGGGATACACATTGTACATTGTTTGGATACAAAGAAAAGAGGAAGATTAAACCTGGGATTACATCAATGCAAAAACCAGTGGTTGTAGAAAAACCAGTTGTATTGAACAAACGTTCGTCCTCTCTTTTCAATGCAGAAGCATACGGGAATTCCTTTCAGTGTTCCAAAAATCTGCAAAGATTGGACCAAGGTTCTCAGAATAAGAGGAAGCACACACATGAACTGGTAAACCTTCTGGATACACAAAAGCTTGCGAGGACAGATATTGTAACCAGTGTTGAGTTTAATCAGAATAAACAGCAAGTTGGATCGGTTTCAAATGTTGCTCACTTCGCTGGCAAACAGAAACTATGTGCAATGATATTCATTTTGATTCTACAAATATTTGCCAAACTTAGCTATGGCCTCCATCTTTTCCCTGCAGATGTGGCGAATCTTAAAAGTAAAATACAAAAAGCCCAAGATGAGTATAAACGACTTTTGGCAGAAGCAAAGGACCTGGACGTGAAAGAAGAGTAG 2100 0.3995 MGPAEIVDLSSDDESETVCLKAVKLEGDFVTDKRYQSHTTRQDSEENLSSTGPSTGHSNSSVLEQGPSPVDDTGISYVSPIGAAPLCRQFWKAGNYDDRIGSKVTVQNAKSYLHVHPMFLHSNATSHKWAFGAIAELLDNAVDERTKLLSMPGDIIQSGATFVIVDKTSNPRDGSPALLIQDDGGGMDPEAMRRCMSFGFSDKKSQFAIGQYGNGVKTSTMRLGADAIVFSCHLNNRILTQSIGLLSYTYLTQTQLDRIVVPMVNYEFDTFTESLKVLNGNEHFMSNLSLLLRWSPYSSEADLLKQFDDIGPHGTKVIIYNLWCNDDGSLELDFDTDSKDIRIAGDIKRIDTLKAWKSINENHIANQFRYSLRVYLSILYLKIPARFQIMLRGKVVKLHNIADDLKYPQFVKYAPLIDGSATGTALTVTTIGFLKEAPQVNIHGFNVYHKNRLILLSWNERESVSRTLARELKGKKGQQVLSKEISILAGCILQADFIEPTHNKQDFERTSLFQKLEVRLKQMTWEYWDTHCTLFGYKEKRKIKPGITSMQKPVVVEKPVVLNKRSSSLFNAEAYGNSFQCSKNLQRLDQGSQNKRKHTHELVNLLDTQKLARTDIVTSVEFNQNKQQVGSVSNVAHFAGKQKLCAMIFILILQIFAKLSYGLHLFPADVANLKSKIQKAQDEYKRLLAEAKDLDVKEE 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00873 699 PANTHER ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. 45 628 IPR045261 GO:0016887
Vian4g00873 699 Pfam Morc6 ribosomal protein S5 domain 2-like 370 528 IPR041006 -
Vian4g00873 699 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 130 344 IPR036890 -
Vian4g00873 699 Gene3D - 107 321 IPR036890 -
Vian4g00873 699 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 132 238 - -
Vian4g00873 699 MobiDBLite consensus disorder prediction 31 69 - -
Vian4g00873 699 MobiDBLite consensus disorder prediction 42 67 - -
Vian4g00873 699 Coils Coil 670 697 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00873 Vian-Chr4 12127657 12147908 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00873 - - gmx:100795667 973.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00873 4 12127657 12147908 Vian4g00873 4 12127657 12147908 ECH