Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00863 ATGACACAAGCACAATCTCTCTTCCCTCCCTTCACTCTTCCATTTCCTTCACCCTGTTCCAATCTCAACTCCCAACGACACCGTTTCTTTTCTCACCCAATTTCACCCCTAATTCAAACCACTTCGATTGCCTCCTCAAACGCCACCGTTTCGGGCAATGCAGCTACATCCGTTCAACCTCTCCCCCAGCTGATTGAAACGCTGATTTCCGGGGTGAATTTGTCGGAAGATGAAGCCGAAGGGTGTTTGGACTCGCTGCTTCACGAGCCAAACGAGGCCTTAATCAGCGCGGTTCTTGTGCTTCTCAGAGCCAAAGGAGAGACTTATGAAGAAGTTGTGGGGTTGGCAAGGGCAATGTTGAGACATGCGACGAAGGTTGAAGGCTTGAACGATGTTGTGGACATTGTGGGAACCGGAGGGGACGGTGCCAACACCGTCAATATTTCAACGGGGGCTTCCGTTCTCGCGGCGGCTTGCGGTGCCAGAGTTGCGAAGCAAGGGAACCGGTCAAGTTCTTCTGCGTGTGGAAGTGCAGACGTGTTAGAAGCTCTGGGAGTGGTGATTGATTTAGGTCCTGAGGGAGTAAAGAAGTGTGTGAATGAAGCTGGGATTGGGTTTATGATGTCTCCAAAATATCACCCGTCGATGAAGATTGTCAGGCCAATAAGAAAGAAGTTAAAGATCAAAACTGTATTCAACATATTGGGTCCAATGTTGAATCCAGCACACGCACCTTTTGCAGTTGTTGGAGTATACACAGAGGACTTGGTCTCCAAAATGGCTAAAGCACTCAACAGATTTGGCATGAAAAGGGCTTTAGTTGTTCACTCTGAAGGTTTGGATGAGATGAGTCCTCTTGGACCTGGTTTAGTGCTTGATGTTACTGCTGACAGGGTTGATAAGTTCTCATTTGATCCCTTGGACTTTGACATTCCTCGTTGTACTATTGAGGACTTAAAAGGTGGTGATCCCGAGTACAATGCAGAGGTTCTGAAGCGTGTTCTAGGTGGAGAGAGAGGGCCTATTGCAGATGCTTTAATTCTAAATGCAGCAGCGGCTCTATTGGTTTGTGGCCGTGTAAGGAACCTAGCTGAAGGGGTGGCTGTGGCGCGTGAAACACAACAATCAGGGAAGGCTCTGAAAACTCTCAACTTGTTCAAGGATGTCTCAAATAAATTTAAAGATGATGTGGGCATAGATGCCTGA 1206 0.4776 MTQAQSLFPPFTLPFPSPCSNLNSQRHRFFSHPISPLIQTTSIASSNATVSGNAATSVQPLPQLIETLISGVNLSEDEAEGCLDSLLHEPNEALISAVLVLLRAKGETYEEVVGLARAMLRHATKVEGLNDVVDIVGTGGDGANTVNISTGASVLAAACGARVAKQGNRSSSSACGSADVLEALGVVIDLGPEGVKKCVNEAGIGFMMSPKYHPSMKIVRPIRKKLKIKTVFNILGPMLNPAHAPFAVVGVYTEDLVSKMAKALNRFGMKRALVVHSEGLDEMSPLGPGLVLDVTADRVDKFSFDPLDFDIPRCTIEDLKGGDPEYNAEVLKRVLGGERGPIADALILNAAAALLVCGRVRNLAEGVAVARETQQSGKALKTLNLFKDVSNKFKDDVGIDA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00863 401 FunFam Anthranilate phosphoribosyltransferase, chloroplastic 45 127 - -
Vian4g00863 401 Pfam Glycosyl transferase family, helical bundle domain 63 123 IPR017459 -
Vian4g00863 401 NCBIfam anthranilate phosphoribosyltransferase 65 386 IPR005940 GO:0000162|GO:0004048
Vian4g00863 401 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE 60 391 IPR005940 GO:0000162|GO:0004048
Vian4g00863 401 FunFam Anthranilate phosphoribosyltransferase 127 392 - -
Vian4g00863 401 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 130 394 IPR035902 -
Vian4g00863 401 SUPERFAMILY Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain 61 126 IPR036320 -
Vian4g00863 401 Gene3D Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain 127 398 IPR035902 -
Vian4g00863 401 Gene3D Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C 63 126 - -
Vian4g00863 401 Hamap Anthranilate phosphoribosyltransferase [trpD]. 63 389 IPR005940 GO:0000162|GO:0004048
Vian4g00863 401 Pfam Glycosyl transferase family, a/b domain 130 380 IPR000312 GO:0016757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00863 K00766 - gmx:100794615 623.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00863 4 11981364 11985180 Vian4g00863 4 11981364 11985180 ECH