Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00847 ATGGCAAAACAGACATCTGAAGTGGCCATTGAAGAGCTGAAGAAGCTTCTCAGTGATTACAGAGAAAAGGAAGAGCTTAATGCAGTGGCAGCAGAAAAAGTTGAAGAAGTCATAGCTGAGTTGCAAAAACATAATGACCCTGCCTTCCAAAGAATCATACTCGGATTCACTTACTTCAAGATCAACAATTTCGATAGGAATCCGGAACTGTATGACAAACTTGCCAATGGTCAAAGCCCCCAGTATCTGGTGTTTGCTTGCTCGGACTCTCGAGTGAGTCCTTCAACTATCCTCCATTTCCAACCTGGAGAAGCTTTCATGGTCCGCAACATTGCTAACATGGTGCCTCCATTTAATCAGCTAAGGCACAGTGGAGTTGGCGCAGCCATTGAGTATGCTATCACTGCTCTCAAGGTACCAAACATTCTGGTCATTGGCCACAGTCGCTGTGGTGGAATCCAAAGGCTTATGAGTCATCCAGAAGACGGTTCTGCCCCCTTTGACTTCATAGATGATTGGGTGAAAATTGGTTTGCCAGCTAAACTCGCGGTTCTGAAAGAATATGAAGGCTATGATTTCAAGGACCAATGCAAATTCTGTGAAAAGGAGTCAGTGAATAACTCGTTAGTGAACCTGAGCACATATCCATATGTTGAAAGAGGAATAAGGAACAAGACCATAGGACTGTTGGGGGGTTATTATGATTTTGTGAAGGGAGAATTCAAGCTTTGGAAGCACGTGACTCATGTCACTGAACCCATTACTATCCCTCTCTCAACCCAGTGA 786 0.4415 MAKQTSEVAIEELKKLLSDYREKEELNAVAAEKVEEVIAELQKHNDPAFQRIILGFTYFKINNFDRNPELYDKLANGQSPQYLVFACSDSRVSPSTILHFQPGEAFMVRNIANMVPPFNQLRHSGVGAAIEYAITALKVPNILVIGHSRCGGIQRLMSHPEDGSAPFDFIDDWVKIGLPAKLAVLKEYEGYDFKDQCKFCEKESVNNSLVNLSTYPYVERGIRNKTIGLLGGYYDFVKGEFKLWKHVTHVTEPITIPLSTQ 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00847 261 PANTHER CARBONIC ANHYDRASE 22 246 IPR001765 GO:0004089|GO:0008270
Vian4g00847 261 SMART Pro_CA_2 75 245 IPR001765 GO:0004089|GO:0008270
Vian4g00847 261 Pfam Carbonic anhydrase 82 240 IPR001765 GO:0004089|GO:0008270
Vian4g00847 261 CDD beta_CA_cladeB 55 244 IPR045066 GO:0004089|GO:0008270
Vian4g00847 261 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 2. 131 151 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vian4g00847 261 Gene3D Carbonic anhydrase 40 255 IPR036874 GO:0004089|GO:0008270
Vian4g00847 261 Coils Coil 3 23 - -
Vian4g00847 261 SUPERFAMILY beta-carbonic anhydrase, cab 42 254 IPR036874 GO:0004089|GO:0008270
Vian4g00847 261 FunFam Carbonic anhydrase 43 253 - -
Vian4g00847 261 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 87 94 IPR015892 GO:0004089|GO:0008270|GO:0015976
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00847 Vian-Chr4 11437569 11440049 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00847 K01673 - gmx:547671 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00847 4 11437569 11440049 Vian4g00847 4 11437569 11440049 ECH