Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00843 ATGGTGGTGGCGGGTCTGTCTCCGGCCATCTCCATCTCCACCGCCACCACAACCCCCTCTTGCTTCCATTCTCGCGCCTCAAAACCACTCTCTTCTTTTTTCGGCCTCCTCCACTCTCCCCAGCCCAATCTCTCCATCTCCGCCAGGAGGAACCGCTACAACACCACTCACTGTTGCCGCTGCTCCCTCAATTCCGGCGATACCTACGTCAATTGGGATTGGAACCGATGGTGCCGCTATTTCTCAGAAATCGAACAGGCCGAGAACTTTGCCTCTGTCCTTAAGTTTCAACTTGATGATGCTGTAGAGAAGGAGGACTTTGAAGAGGCCATTAAGTTGAAGAGGGCTCTTTTGGAAGCAACGTCCAAGGACACTGTTGCTAAAATTATGGATCAGTTGAAGAGTGCTATAGATGATGAACGATATCATGATGCTTCAAGATTGTGTAAATGCACTGGAAGTGGACTGGTGGGCTGGTGGGTGGGTTACTCAAAAACCACTGATGACCCCTTTGGTAGAATTATACATATAAGTCCTGGCATGGGTAGGTTCATTGGCAAGAGTTACAGTCCAAGACAATTGATGACAGCATCTAGTGGAACTCCAATTTTTGAAATTTATGTGGTAAAAAATGCTGATGATACGTATCATATGCAGGTAGTGTATTTGCGACAAGCCAAAGGAAAGTCAAAGAGAAACCCTCTATCTCTATCTACTAAAGGCCCATCCAAACCTGAGGTGGATAATGTATCTTCATCAGTTGAGGTGCAGGAAGATGAAGAGAAGGTTGAAAGAAATGATGAGAAAAACAATAACATCGAGGCAGTAACTGAAGAGGGAATTAAAAGTGTGATAAATTTTCTTAAAGAAAAAATTCCAGGACTAAAAGTCAAAGTTATGAATGTTAATGTTGAAGAGGAAGCAGCAGAGAACAATGATTCTATTCAGCAATTGATGGAGGATGATAGTAATAAAACTGGCACTGGTGAGAATCATGAAGATGAAGTTGATAATCTCGATGAACCTGATGGGGTCACTCTAGACAGAGATGGAGATGCCATAGAAGAAGAAAAGGATTTGGAAATGAAGCTTTTTATTGGTGGGGTTGTACACAACAATGAGGATACTCCTCTCAAGGATGATTTTGTACGTCTTCCAGCAGTAATAAAAAATATGGAAAAAGATTCTTTTGTCTTCAATTTTGCTGGCAAAAATATAGACTATGGTATCAAAGAAGATAAAGCTCCCAATATCAAAGTGGCCGCTTTGGCAGCTCAAGGAGTCTCGGAGCTTATGCCTCCTGATGTTGCTAATGCATTTTGGAGTTCCGACAAAGTGTCTTCCAAGATCTCCAAAAGCATGCGTGATATTGTCAGAGTTGCTATGAGTCAAGCTCATAAAAGAACTAGATTATCTGGGGATACATATTTTAACCGGATTACCTGTTCAAGAGGGGATTCTGATCCTTTTGATGGACTCTATGTTGGCGCATTTGGCCCTTATGGCATGGAAGTAGTTCATTTGAGGCGAAAATTTGGACATTGGAATGAAGGGGACAGTGAAAATAATACTTCAGATGTTGGATTCTTTGAGTATGTAGAGGCTGTGAAGTTAACTGGGGATCTTAATGTTCCTGCTGGCCAGGTGACATTCCGTGCAAAAATTGGCAGAGGCAATCGCAACACCAATCGTGGGATGTATCCTGATGATTTAGGAGTGGTTGCTAGTTATAAAGGCCAGGGGAGAATAGCTGACTATGGTTTTCGAAATCCAAAATGGGTCGAAGGGGAACTGCTCCAACTTAATGGCAAGGGCATGGGACCTTACATGAAAGGTGCAGACCTCGGCTTCCTTTATGTAGTACCTGAACAAAGTTTTCTAGTGTTATTCCACCGGTTGAAACTACCCGAAATCGCAACTCACAAGGATCACACCGTCGTCATGAAAAAATCGCTCTCCAAAGGCTCGGAGTCGTCCACTCAGTTGGACTCGCCGCTCCAATTCCACTCGCCGATGCGGTGGGACGGGACCGATCCGCCGGAGTCTCCGGAATACCGATCGCCGGGAAACTTGACGGAAAGGCATGCGGACCACTCTATGGCAATCGTCACCGTCGGCAACCTCAAGCAGCTCGTTCCGGACAAGCGCGCGGAGCACCGGAAGCCACCGGAAAATATGCCGCCTCCGTTGAGGGTGTTCAACGGCACGGTGACGGAGGAGACGCAGCGTCCGGCGGCGAAAGCGGCTCCTGCGATGGTTGGAGGCGAGAGGAGATCGAGGTCGTCCGGGTGGACTACGGAGGAGACGGTGTGCAAGGCGGCCCTAGGGTTCCGGCTGAGCGAGATGGTGGTGTGTCTGATTTCGTTTTCTGTTATGGCGGCGGATAAGACGCAAGGATGGAGCGGTGACTCCTTTGATCGCTATAGAGAATATAGGTACTGTTTATCTGTGAATATAATTGGATTTGCATACTCAGCGTTGCAAGCATGTGATCTGTCATGTCAACTTGCCACGGGCATGTCCTACCACTCTGTTTCTGTTCCTATGTTTTACTTTACTTCTTTTCTGTCAGAGAATGATCTGGAGTTTAAGTTTGAATATACTGTTCTGGCTTATCTTCTGATATCAGCATCATCATCTGCAGCCACACGGGTTGATGATTGGATATCGAATTGGGGGAAAGATGAGTTCACAGAAATGGCCACTGCTTCAATTGCAATGTCCTTCCTCGCTTTTCTTGCCTTTGCTATGAGTTCACTCATCTCTGGTTACACCCTATGCAACCGCAGCTCCATGTGA 2799 0.4598 MVVAGLSPAISISTATTTPSCFHSRASKPLSSFFGLLHSPQPNLSISARRNRYNTTHCCRCSLNSGDTYVNWDWNRWCRYFSEIEQAENFASVLKFQLDDAVEKEDFEEAIKLKRALLEATSKDTVAKIMDQLKSAIDDERYHDASRLCKCTGSGLVGWWVGYSKTTDDPFGRIIHISPGMGRFIGKSYSPRQLMTASSGTPIFEIYVVKNADDTYHMQVVYLRQAKGKSKRNPLSLSTKGPSKPEVDNVSSSVEVQEDEEKVERNDEKNNNIEAVTEEGIKSVINFLKEKIPGLKVKVMNVNVEEEAAENNDSIQQLMEDDSNKTGTGENHEDEVDNLDEPDGVTLDRDGDAIEEEKDLEMKLFIGGVVHNNEDTPLKDDFVRLPAVIKNMEKDSFVFNFAGKNIDYGIKEDKAPNIKVAALAAQGVSELMPPDVANAFWSSDKVSSKISKSMRDIVRVAMSQAHKRTRLSGDTYFNRITCSRGDSDPFDGLYVGAFGPYGMEVVHLRRKFGHWNEGDSENNTSDVGFFEYVEAVKLTGDLNVPAGQVTFRAKIGRGNRNTNRGMYPDDLGVVASYKGQGRIADYGFRNPKWVEGELLQLNGKGMGPYMKGADLGFLYVVPEQSFLVLFHRLKLPEIATHKDHTVVMKKSLSKGSESSTQLDSPLQFHSPMRWDGTDPPESPEYRSPGNLTERHADHSMAIVTVGNLKQLVPDKRAEHRKPPENMPPPLRVFNGTVTEETQRPAAKAAPAMVGGERRSRSSGWTTEETVCKAALGFRLSEMVVCLISFSVMAADKTQGWSGDSFDRYREYRYCLSVNIIGFAYSALQACDLSCQLATGMSYHSVSVPMFYFTSFLSENDLEFKFEYTVLAYLLISASSSAATRVDDWISNWGKDEFTEMATASIAMSFLAFLAFAMSSLISGYTLCNRSSM 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00843 932 Coils Coil 256 276 - -
Vian4g00843 932 MobiDBLite consensus disorder prediction 650 692 - -
Vian4g00843 932 Pfam Cyclin D1 binding domain 478 635 - -
Vian4g00843 932 PANTHER PROTEIN EXECUTER 1, CHLOROPLASTIC 26 637 IPR044680 GO:0010343
Vian4g00843 932 MobiDBLite consensus disorder prediction 231 269 - -
Vian4g00843 932 Pfam Casparian strip membrane protein domain 770 914 IPR006702 -
Vian4g00843 932 MobiDBLite consensus disorder prediction 651 667 - -
Vian4g00843 932 Coils Coil 301 321 - -
Vian4g00843 932 MobiDBLite consensus disorder prediction 308 349 - -
Vian4g00843 932 MobiDBLite consensus disorder prediction 231 252 - -
Vian4g00843 932 MobiDBLite consensus disorder prediction 308 324 - -
Vian4g00843 932 MobiDBLite consensus disorder prediction 255 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00843 Vian-Chr4 11321638 11333493 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00843 - - gmx:100786321 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00843 4 11321638 11333493 Vian4g00843 4 11321638 11333493 ECH