Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00831 ATGAGAAGGTTGTTAATGATGTTGGGACTATGCGTCCTAGTGTTGTCCCTGTTTCCAGTTGCATTATCGGAGCGGTGCCACCCACAAGACAAGAAGGTGCTCCTCAGGTTCAAAAGGGAACTCAACAACCCTTACTTCCTAGCTTCTTGGGACCCAAAAGAGGACTGCTGTGACTGGTACTGTGTCAAGTGTGACGACAGAAATAACCGTATCTACACAATATTTCTAAGATCCGATGAGCCAGACCCCAATGTCACCGGCCAAATACCACCCTCTGTCGGTGACCTCCCTTACCTCCAGGGCCTCAGCTTCCACAACCTCCCCAACCTAGTCGGCCCAATTCAGCCCACCATCGCCAAACTCCACAAACTAACCGGTATCTTTTTCTCCAATACTGGTATCTCAGGCCCAATACCTGAATTTCTGGCCCAGATTAAGACCCTCCAGTATATCGAACTTTCCTCTAACAGACTCTCGGGCCCCATTCCCAGCTCACTTTCCCAACTGCCTAATCTCATCTCTCTACAGCTGGACAGGAACAAATTGACGGGCCGAATCCCGGCCTCTTTTGGATCCTTCAAGAAGCCCGGGCCAGATCTCATCCTCTCTCACAACCAACTTTCCGGGCCCATTCCCGCTTCCTTGGGCAACCTAGACCCAGACAGGATAGACTTGTCAAGGAACAACTTCGTAGGCGATGCTTCATTTCTTTTCGGGAGCAAGAAAAAGACTCGGGTACTTGACCTTTCCAGGAACGCCTTCTCCTTTGATCTGTCTCGTTTGACGTTTCCCAAGGAAACCTTAACTTGGTTGGATATCAGTCACAATAATATCTATGGCAGCATTCCAATGGCGTTGACGAAAGTGCGATATTTCCAGCAATTGAACTTCAGTTTTAATCCTGGCTTGAAGGGTCAAATACCGCAGGGTGATATTGATGACAGCTCAAGCTGCCTTACCTCCAGAGCTTTACTGGCAAAAGATGCTTCCAAACACACCAATCCCCAAAGCAAGACCTTGCCAAGCTTGCTTCTCACCATTAACCACTTTGCTTCTGCTATGGAGTTTCACTGCCTTGCATTGTTTTTTTCTCTCATTGTGATACTGATGGCTGCTCAGGCTGCCTTACCTCCAGAAGTTTACTGGGAAAGGATGCTTCCAAACACACCAATCCCCAAAGTAATCAGAGATTTTTCCAAGCTAGATGGTGCCAAAGAGATTTCATCACAAGAGAAATTCCCTTACTTCTATACCTATGGTATTAAGAAAAAGGAATTACAAGATGGTTTCCCTTACTTCTATACCTATGGTATTAAGAAAAAGGAATTACAAGATGGTGTCAGAGAGATTTCATCACAAGAGAAATTCCCTTACTTCTATGGCTATGGTATTAAGAAAAATGAATTAGAAGATGGTGTCAGAGAGATTTCATCACAAGACAGTTTTGTTTCCATAGATGGTGTAAAGAAAAATCAGTTCCAAGATGATTCCAAAGAAATTCCAGCGCAAGATGAGACAACTTATGACCCTCAATCGAAGGAAAATGCTGTTCTTCGAGGGATAGGCCCAGTTGCTAATCATCATCATCATGATCACTCAAAACCAAGTCTATTTTTCTTAGAAGAAGGATTGAGGCGGGGCACAAAATTGGATGTGCAGTTCCCTAAAAGAAAAATTGTAACCCCGTTGTTGCCCCGAGAAATTACAGAACACTTACCATTCTCATCAGAAAAGATAAATGAAATATTAGAGATTTTGTCTGTGAAGCCAGATTCTAAGAATGCTGAGAATGTGGAGGAAACTCTGAAGATCTGTGAAGAGCCTGCAATGAATGGTGAAGAAAAACACTGTGCAACTTCAGTAGAATCCATGGTAGACTTTGTCACTTCTAAACTTGGCAATAACGCCCATGTTACTTCTACAGAAATTGAAAGCAAGTCCCAAAAGTTCATAGTTAAAGATGGAGTGAAGATTTTAGCAGAAGAAGAGATAATTGCATGTCACCCAATGAATTACCCATATGTTGTGTTTTACTGCCATAAGATATCAAATAGCACTGCACATTTTATACCATTGGAGGGAGAAGATGGAACAAGGGTTAAAGCTGTAGCAGTGTGCCACAAAGACACGTCAGAATGGGATCCAAACAATATTGCATTCCAAGTTCTCAAAGTCAAGCCTGGGACCGGTTCTGTGTGTCATTTTTTCCCTGACGGTCATCTTATTTGGTATGCTAAATAG 2241 0.4342 MRRLLMMLGLCVLVLSLFPVALSERCHPQDKKVLLRFKRELNNPYFLASWDPKEDCCDWYCVKCDDRNNRIYTIFLRSDEPDPNVTGQIPPSVGDLPYLQGLSFHNLPNLVGPIQPTIAKLHKLTGIFFSNTGISGPIPEFLAQIKTLQYIELSSNRLSGPIPSSLSQLPNLISLQLDRNKLTGRIPASFGSFKKPGPDLILSHNQLSGPIPASLGNLDPDRIDLSRNNFVGDASFLFGSKKKTRVLDLSRNAFSFDLSRLTFPKETLTWLDISHNNIYGSIPMALTKVRYFQQLNFSFNPGLKGQIPQGDIDDSSSCLTSRALLAKDASKHTNPQSKTLPSLLLTINHFASAMEFHCLALFFSLIVILMAAQAALPPEVYWERMLPNTPIPKVIRDFSKLDGAKEISSQEKFPYFYTYGIKKKELQDGFPYFYTYGIKKKELQDGVREISSQEKFPYFYGYGIKKNELEDGVREISSQDSFVSIDGVKKNQFQDDSKEIPAQDETTYDPQSKENAVLRGIGPVANHHHHDHSKPSLFFLEEGLRRGTKLDVQFPKRKIVTPLLPREITEHLPFSSEKINEILEILSVKPDSKNAENVEETLKICEEPAMNGEEKHCATSVESMVDFVTSKLGNNAHVTSTEIESKSQKFIVKDGVKILAEEEIIACHPMNYPYVVFYCHKISNSTAHFIPLEGEDGTRVKAVAVCHKDTSEWDPNNIAFQVLKVKPGTGSVCHFFPDGHLIWYAK 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00831 746 SMART BURP_2 536 746 IPR004873 -
Vian4g00831 746 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 142 234 - -
Vian4g00831 746 Gene3D Ribonuclease Inhibitor 25 327 IPR032675 -
Vian4g00831 746 PANTHER POLYGALACTURONASE INHIBITOR 1 13 325 - -
Vian4g00831 746 Pfam Leucine rich repeat N-terminal domain 28 65 IPR013210 -
Vian4g00831 746 Pfam BURP domain 537 744 IPR004873 -
Vian4g00831 746 SUPERFAMILY L domain-like 25 310 - -
Vian4g00831 746 ProSiteProfiles BURP domain profile. 538 746 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00831 Vian-Chr4 11030676 11045625 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00831 1 347 Receptor kinase-like Gene Family AT2G15080 29.639 7.61e-30 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00831 - - var:108332058 807.364