Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00813 ATGAACCTTCCATTTCCCGCCATTTTTATCATCTTCATTATCTCCATCCCTTCATCTATCGCCGGCGCTGGCGTCGACGCCGTTTCGCGCCTTATTGAGACCCAAGACCGCGAAAGAGCTCCTCCTTCCGTTCAGGAAGCCGCCGCGCGCGGCGTCCTCCTCCGCTTGTTGCCTTCTCTCTCCTCTAGCTTCCACTTCCAGATCATCTCCAAGGAATACATATATTCTTTTATTATTAAGCAATGCGATGGTGAATATTGCTTCGTTATCAAAAACCTTCCTTCTTTTGCGACACAAAAGGATCCACAAATTCTGATTGAAGGAACAACAGGAGTGGACATAGTGTCGGGTCTGCACTGGTATCTGAAGCATTGGTGCGGTTCACACATATCATGGGACAAAACCGGTGGTTCGCAGCTATTTTCCGTGCCCAATGCGGGCTTTCTCCCACGCGTTCCCCACTCTGGAGGGGTCTCTGTTCAGAGGCCTATTCCGTGGAGCTATTACCAAAATGCAGTTACTTCTAGCTATTCCTTCGCTTGGTGGGACTGGGAAAGATGGGAAAAGGAAATTGACTGGATGGCTCTGCAGGGTGTCAACTTGCCTCTTGCGTTTACGGGACAAGAGGCTATTTGGCGGAAAGTGTTCCAGCTATCTGACATCATATTCAACCTCCAGGAGAAATTTAACATGAGTATTTCTGATTTGGATGATTTCTTTGGAGGTCCGGCATTTCTGGCATGGTCACGCATGGGGAATTTACATGGATGGGGTGGACCACTGCCACAGAGCTGGTTTGATAATCAATTAATCTTACAGAAGAAAATTCTCGCCAGAATGTATGAGCTTGGAATGACACCAGTGCTGCCAGCTTTTTCTGGAAATGTCCCTGCTGCGCTAAAATATATATTTCCATCAGCAAAAATAACACGCTTAGGAAATTGGTTTTCTGTAAAGAATGACCTCAAATGGTGCTGCACCTATCTTCTTGACGCAACTGATTCTTTGTTCATTGAGATTGGGAAAGCATTCATTGAGAAACAACTACAAGGTGGGCAGAGTTGTTGGCACAGTAAAATGTTAAGGGAAATTGATTTTGATACTTTTGACGAGAACACCCCACCAATTGATGATCCAGAGTACATTTCATCATTAGGTGCAGCAATTTTTAAAGGAATGCAGAGTGGTGATGATGATGCTGTTTGGCTGATGCAGGGGTGGCTGTTTTCATATGATCCCTTCTGGAGACCTCCTCAAATGAAGGCCCTTTTACATTCTGTTCCTGTTGGAAAGCTGGTGGTTCTAGACCTATTTGCTGAAGTAAAACCCATTTGGGTTACCTCAGAACAGTTTTATGGAGTTGGAGTTGGAATGTCTATGGAAGGTATTGAACAGAATCCCATTGTCTATGATTTGATGTCTGAAATGGCATTTCAGCACAAGAAGATTGATGTTAAGGCATGGATTGACATGTATTCAACTAGACGATATGGACAGTCACTTCCTTTGATACAAGAGGGATGGAATGTCTTATATCACACTATTTACAATTGCACAGATGGAGCCTATGACAAAAACAGAGATGTCATCGTAGCATTCCCTGATGTTGACCCTTCCTTAATTTCAGTACATCATGATCAGTCTCGGCACTATGACATGCCCTCAGGAACATTTATCAAGGAAACGACCGATACATTTGATCGACCACATTTATGGTATTCAACTTCTGAAGTAATCTATGCATTGGAGTTTTTTATAACTAGTGGAGATGAACTTTCTAGAAGTAAAACTTACAGGTATGACCTAGTTGATCTGACAAGACAAGTCTTGGCAAAATATGCAAATGAATTATTCTTTAAGGTCATAGAGGCATATAAATCACATGATGTCCATGGAACGACCCTTCTCAGCCAGAGATTTCTGGACCTTGTGGAGGATTTGGATACACTATTGGCTTGCCACGATGGGTTTCTTCTGGGACCTTGGTTAGAAAGTGCAAAGAAACTAGCTCAAAATGAAGAACAGGAGCGACAGTTTGAGTGGAACGCTAGAACGCAAATCACCATGTGGTTTGACAACACAAAGGAAGAAGCCAGTCTGCTTCGTGACTACGGAAACAAGTACTGGAGCGGGCTTCTGCATGATTACTATGGCCCCAGAGCTGCTATTTACTTTAAATATTTAAGAGAAAGCTTAGAGAAAGGTAAAGATTTCAAGCTAATTGAATGGAGGAGGGAGTGGATAAAGCTTACTAATGAATGGCAAAAGAGTAGGAACATTTTTCCTGTGGAAAGTAAGGGAGATGCTCTAATCACTTCTCGGTGGCTTTTTAACAAATACCTGAACGTCACCAATCCTGAAACAAAGCTTATACAGGAGTAA 2382 0.4299 MNLPFPAIFIIFIISIPSSIAGAGVDAVSRLIETQDRERAPPSVQEAAARGVLLRLLPSLSSSFHFQIISKEYIYSFIIKQCDGEYCFVIKNLPSFATQKDPQILIEGTTGVDIVSGLHWYLKHWCGSHISWDKTGGSQLFSVPNAGFLPRVPHSGGVSVQRPIPWSYYQNAVTSSYSFAWWDWERWEKEIDWMALQGVNLPLAFTGQEAIWRKVFQLSDIIFNLQEKFNMSISDLDDFFGGPAFLAWSRMGNLHGWGGPLPQSWFDNQLILQKKILARMYELGMTPVLPAFSGNVPAALKYIFPSAKITRLGNWFSVKNDLKWCCTYLLDATDSLFIEIGKAFIEKQLQGGQSCWHSKMLREIDFDTFDENTPPIDDPEYISSLGAAIFKGMQSGDDDAVWLMQGWLFSYDPFWRPPQMKALLHSVPVGKLVVLDLFAEVKPIWVTSEQFYGVGVGMSMEGIEQNPIVYDLMSEMAFQHKKIDVKAWIDMYSTRRYGQSLPLIQEGWNVLYHTIYNCTDGAYDKNRDVIVAFPDVDPSLISVHHDQSRHYDMPSGTFIKETTDTFDRPHLWYSTSEVIYALEFFITSGDELSRSKTYRYDLVDLTRQVLAKYANELFFKVIEAYKSHDVHGTTLLSQRFLDLVEDLDTLLACHDGFLLGPWLESAKKLAQNEEQERQFEWNARTQITMWFDNTKEEASLLRDYGNKYWSGLLHDYYGPRAAIYFKYLRESLEKGKDFKLIEWRREWIKLTNEWQKSRNIFPVESKGDALITSRWLFNKYLNVTNPETKLIQE 793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00813 793 Gene3D - 23 155 IPR029018 -
Vian4g00813 793 Pfam Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain 47 146 IPR024240 -
Vian4g00813 793 Gene3D Glycosidases 454 480 - -
Vian4g00813 793 Gene3D Glycosidases 163 453 - -
Vian4g00813 793 Pfam Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain 168 453 IPR024733 -
Vian4g00813 793 Gene3D - 482 790 - -
Vian4g00813 793 Pfam Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain 488 779 IPR024732 -
Vian4g00813 793 PANTHER ALPHA-N-ACETYLGLUCOSAMINIDASE 9 454 IPR007781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00813 Vian-Chr4 10685878 10699495 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00813 K01205 - gmx:100791160 1367.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00813 4 10685878 10699495 Vian4g00813 4 10685878 10699495 ECH