Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00811 ATGGTAACTGCAGATGAGAGGGTCGTCGCTGTGATCATGGTTGGAGGACCCACTAAAGGTACTAGATTTCGTCCATTGTCATTCAACGTACCCAAGCCACTGTTTCCATTAGCAGGACAACCAATGGTTCATCATCCTATTTCTGCTTGTAAAAGGATTCCTAATTTGGCTCAGATTTATCTGATTGGTTTCTATGAGGAACGTGAATTTGCCTTATATGTATCTTCTATCTCCAATGAGCTTAAAATCCCTGTTAGATACTTGAAGGAAGACAGACCACATGGTTCGGCTGGTGGCCTTTATCACTTTAGAGATCTGATGATGGAAGATGATCCGTCATATATCTTTTTGCTGAACTGTGATGTATGCTGCAGTTTTCCACTGCCAGAAATGCTAGATGCTCACAAAAGATATGGCGGGATGGGAACAATACTAGTTGTGAAGGTTTCTGCAGAGTCAGCGAGCGAGTTTGGGGAATTAGTTGCTGATCCAACAACTAATGAACTATTGCATTACACAGAGAAACCTGAAACTTTTGTAAGTGATCGTATAAACTGTGGTGTGTACATATTTACACCAGATATCTTTACAGCCATAGAGGGTGTTTCTACTCAGCGCAAAGACAGAGCTAACCTAAGACGTGTTTCCAGCTTTGAAGCAATGCAGCCAGACCCAAGGACTCTTCCAGCAAATTATGTCAGATTGGATCAAGATATCCTCTCACCTCTTGCGGGGAAGAAACAGTTATATATTTATGAAACCAATGACTTTTGGGAACAAATCAAAACTCCAGGGATGTCCATAAAATGTTCTAGCTTGTATCTTGCCCAATTTCGCCACACATCTCCCCATCTACTAGCAAATGGAGATGGTATTAAGAAAGCCGGCATCACTGGTGATGTTTATATTCACCCGTCAGCAAAAGTGCATCCATCTGCTAAGATTGGTCCAAGTGTATCAATATCTGCAAATGCTCGTATTGGAGCCGGTGCAAGGCTAAAAAATTGTATCATCCTTGATGATGTAGAGATCAAGGAAAATGCTGTTGTTAGTCATGCAATTGTTGGATGGAAATCCTCTATTGGACTATGGGCACGTGTCCAGGCTAGTGGAGATTACAATGCAAAGCTTGGGGTAACTATACTTGGTGAATCTGTAACAGTTGAGGATGAGGTGGTGGTTTTTAATAGCATTGTTCTGCCACATAAGACCCTAAATGTTGGTGTTCAAGATGAGATTCTTTTATAG 1248 0.4143 MVTADERVVAVIMVGGPTKGTRFRPLSFNVPKPLFPLAGQPMVHHPISACKRIPNLAQIYLIGFYEEREFALYVSSISNELKIPVRYLKEDRPHGSAGGLYHFRDLMMEDDPSYIFLLNCDVCCSFPLPEMLDAHKRYGGMGTILVVKVSAESASEFGELVADPTTNELLHYTEKPETFVSDRINCGVYIFTPDIFTAIEGVSTQRKDRANLRRVSSFEAMQPDPRTLPANYVRLDQDILSPLAGKKQLYIYETNDFWEQIKTPGMSIKCSSLYLAQFRHTSPHLLANGDGIKKAGITGDVYIHPSAKVHPSAKIGPSVSISANARIGAGARLKNCIILDDVEIKENAVVSHAIVGWKSSIGLWARVQASGDYNAKLGVTILGESVTVEDEVVVFNSIVLPHKTLNVGVQDEILL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00811 415 FunFam Mannose-1-phosphate guanyltransferase alpha 7 278 - -
Vian4g00811 415 CDD M1P_guanylylT_A_like_N 10 274 - -
Vian4g00811 415 Pfam Nucleotidyl transferase 10 209 IPR005835 GO:0009058
Vian4g00811 415 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 2 278 IPR029044 -
Vian4g00811 415 PANTHER SUGAR-1-PHOSPHATE GUANYL TRANSFERASE 9 414 - -
Vian4g00811 415 SUPERFAMILY Nucleotide-diphospho-sugar transferases 9 357 IPR029044 -
Vian4g00811 415 FunFam Putative GDP-mannose pyrophosphorylase 284 412 - -
Vian4g00811 415 Gene3D Hexapeptide repeat proteins 285 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00811 Vian-Chr4 10641721 10645513 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00811 K00966 - gmx:100780801 796.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00811 4 10641721 10645513 Vian4g00811 4 10641721 10645513 ECH