Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00804 ATGGCTGGAGGTTCGCTAGGAGACAACATAGGATTGAAGGAAGATGTCATCAAGAGGGTATGTGGTTTAGCCTTCAAAGCTCACAAGCACAAGACACAAGACAAGCTCTACTTTTACGAAAAGGTTCAAATTTCTTCGGGAACTTACCATGTTTTCAGCTTCTCAGGATCTTGGGATGCCACTGAATGGTTTGTTAACAAACCCTATGGAGAAACTAAGATAGATCTTACCCTGTTCCCTTCTCTCAGAAGTATTGGTAACGACGAAGCTGCTTTGGTGAACCAAGGCTTCGCAAAGAGATTCGACCATATATTCAAAGCCACCCCATTTAAATCCGAGGTAAACAAGGCTATAGGAGATGGGAAACAAGTGGTGTTTACGGGGCATTCCTCTGGTGCTGCTATGGCAGTATTTGCAACATTTTGGACCTTGGAAGAATATCTTAATCCAACCAAAACTCAAAAACCTAAACCACCCTTCTGTGTCACTTTTGGGTCTCCCTTAATTGGTAATCATATTCTCTCTCACGCTTCAAGGAGAGAAAACTGGTCTCGTTATTTCATACATTTTGTTTTGAGATATGACATAGTGCCACGGATTTTGCTTGCTCCCGTATCTTGTATTGAGAAAACTTTTGGTTCTATTTTCCAATCCTTGAATCCCAAGTTCAAAACTTCCATCCAAGATTCACCACAAGCAGCTGAATTTTTCTCATCTGTGATGAGAAACACAGCCAGTGTTACAAGCCATGCTGCGTGCATTCTCATGGGCAGCACAAATTTGTTACTTGAGACAGTGGCAAACTTTGTTGACTTGAGTCCTTATAGGCCATTCGGAACATACATTTTCTGCAATGGAAATGGACAGCTGATTGTGGTGAAAAACTCTGATGCCGTTTTGCAACTGTTATTCCACACTGCTCAGCTAAGCGATTTGGCAGAACTTCCAGAAGTTGCCAAAGATAGCATATCGCAACACCTGTCCTATGAGGCTGAGTTGGAAGATAGCTTGGGAATGCAGAATATAGTATACCTGGAACAACTTGAGCAACTTCCCTTGTCTGCTGATGGCTCTGACAGTGATGTTGCAACAATTAGCGCAGCTTTGGATGGCCTTGGACTGAGCACAAGAGCAAGGCTGTGTCTACGAGCAGCAGGTGAGTTGCAAAAGCAGAAAAAGAAAAACGAGGAGAAGATCAGTAAGGAGTTTGAGGATAAAGCTGTGGCGAGCATGAGGTATCTGGAGAACTACAAAACATCATGCGAGGTGCAAAAGGGAACAGGATACTACGATGCTTTTAAGGTGCAGAAGGAGGAAAACGACTTCCAAGCAAATGTGAAGAGGCTAGTGCTGGCAGGGGTATGGGATGAGGTGATTGAGATGCTGAAGAGGTATGAACTCCCAGATGAGTTTGAAGGGAAGAAAGAATGGATTCAACGTGGAACCAACTTTCGTCGCCTTGTGGAGCCTTTAGACATAGCGAACTACCATCGGCATTTGAAGAACGAGGACACGGGACCTTACATGATCAGGGCGAGACCAAAACGATACAGATACAGTCAAAGATGGTTGGAGCATGCGAAGAGGGAGCCAAAAGCTGTTCCCATCACTGAATCCTCCTTCTGGGCTGAAGTGGAAGAGCTTCATAGCTGGATCAATAGCAAGAAGGCTTTTGATGAAGTCAGGGAAAGGGTTGAGCAACTTCAACGTGACCTTAAAAAGTGGACTGATGAAAACGAACTCACCAAGGATACTTTCTCCAAGGACCCTAGCTTCATTAAATTCTATGAAATTCTGCCTCCTGAAAACAAGGCAAACATAACTGCTCTTCTTGCCAATGTCAAAGGATTTTAA 1854 0.4374 MAGGSLGDNIGLKEDVIKRVCGLAFKAHKHKTQDKLYFYEKVQISSGTYHVFSFSGSWDATEWFVNKPYGETKIDLTLFPSLRSIGNDEAALVNQGFAKRFDHIFKATPFKSEVNKAIGDGKQVVFTGHSSGAAMAVFATFWTLEEYLNPTKTQKPKPPFCVTFGSPLIGNHILSHASRRENWSRYFIHFVLRYDIVPRILLAPVSCIEKTFGSIFQSLNPKFKTSIQDSPQAAEFFSSVMRNTASVTSHAACILMGSTNLLLETVANFVDLSPYRPFGTYIFCNGNGQLIVVKNSDAVLQLLFHTAQLSDLAELPEVAKDSISQHLSYEAELEDSLGMQNIVYLEQLEQLPLSADGSDSDVATISAALDGLGLSTRARLCLRAAGELQKQKKKNEEKISKEFEDKAVASMRYLENYKTSCEVQKGTGYYDAFKVQKEENDFQANVKRLVLAGVWDEVIEMLKRYELPDEFEGKKEWIQRGTNFRRLVEPLDIANYHRHLKNEDTGPYMIRARPKRYRYSQRWLEHAKREPKAVPITESSFWAEVEELHSWINSKKAFDEVRERVEQLQRDLKKWTDENELTKDTFSKDPSFIKFYEILPPENKANITALLANVKGF 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00804 617 Pfam Enhanced disease susceptibility 1 protein EP domain 413 597 IPR041266 -
Vian4g00804 617 Pfam Lipase (class 3) 51 200 IPR002921 GO:0006629
Vian4g00804 617 Coils Coil 558 585 - -
Vian4g00804 617 PANTHER PROTEIN EDS1-RELATED 5 606 IPR044214 GO:0006952
Vian4g00804 617 CDD Lipase_3 51 200 - -
Vian4g00804 617 Gene3D alpha/beta hydrolase 19 249 IPR029058 -
Vian4g00804 617 SUPERFAMILY alpha/beta-Hydrolases 30 204 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00804 Vian-Chr4 10553373 10555817 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00804 79 191 Acyl Lipid Metabolism Gene Families AT5G14930 33.628 1.84e-08 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00804 K18875 - gmx:100778851 984.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00804 4 10553373 10555817 Vian4g00804 4 10553373 10555817 ECH