Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00622 ATGTTAAAGCAAATTCTTAGCAAATTGCCCAAGAAGGTGCCAAAATCTGACACATCAGATTCGGCTCAGAGTGATTCCGGGAGTGCTACTACTTTTGCAAATGTCTTTCAGTGTTCGAATGTTGGGGTTGCCATTTCAAACAAATTAAATGCAGTGAAGCGGGTATCATCAGTGGTATTTCCAGCAAGCTTGAGTGCTGGAGTGGAAGCAGTTGATCCCCATATATCTTTCAAAGATGTTTCAAATATACAGAAGCAAAACCTGTTTATCAGTAAGTTGAATCTTTGCTGCACTGTTTATGATAAGAATTGTACAGAGAAAGATGTTAAACATCAAACATTAGTAGAGCTTGTTGATTTTGTTTCTTCTGGATCTGCAAAGTTCACAGAACCATCAATAGCTGCAATGTGTAAAATGTGTGCAAGTAATTTGTTCAGGGTTTTCCCACCTAAGTTTCGTCCTAGTGCTACTGGTGGAGAAACAGAAGATGAAGAGCTTATGTTCGATCCTTCCTGGTCTCACCTGAAAATTGTTTATGATCTTCTCCTTCAATTCATAAATTATAACGCACTTGATCTAAAGGTGGCAAAATTGCATATTGATAATGCGTTCATTGTTAGATTGCTTGACCTTTTTGATTCTGAGGACCCTAGAGAAAGAGATTGCCTGAAAACAATTCTGCATAGAGTCTATGGGAAATTCATGGTACACAGGCCTTTCATACGGAAATGTGTCAGCAATATCATCTACCGATTTGTTTTCGAGACTGAACGTCATAATGGAATTGCTGAGTTGCTGGAGATTTTTGGGAGTGTAATTTGTGGGTTTGCGTTGCCACTGAAGGAGGAGCACACAATATTTTTGTGTAGGGTTTTAATGCCCTTACACAAACCTAAATCTGTTGGTAGTTACCATCAGCAATTAACATATTGTGTTTTACAGTTCATTGATAAGGATCCAACACTGGCTAGCACGGTGATAACGGGGCTACTGAAGTACTGGCCAGTAACAAATAGCCAAAAGGAGCTCATGTTCATAAGTGAGTTGGAAGAGGTTTTGGATGCCACAATCATGACTGAATTTCAGAAGGTTATGGTCCCACTGTTCCGACGAATAGCTTGCTGTCTCAATAGCTATCATTACCAGGTGGCTGAACGAGCTCATTTGCTATGGAACAACGAACACATCTTCGATGTTGTCTCTCAAAACCGGGAGGTGATTCTGCCTCTTGTGTTCACAGCACTTATACATAACACCCAAAATCACTGGAACCGAGCAGTGCTCAACCAGACCGAGAACATGAGGAAGATGCTGTCTCAGATGGACGAGGAACTGGTGCTTGCCTGCCAACTCAAGTTGGAGGAGGAAGATTCAAGGTCAAGTGCCGCAGCTGAGCAGCGAAGAGTGACATGGGAACTTCTTGAAGCTGCTGCCACTGCCAATATCCAACCTATAGCTGTAGCAGGTGATGTTGTAGCATCTCCTGCATGTTCGGTGGCATGCTAG 1506 0.4197 MLKQILSKLPKKVPKSDTSDSAQSDSGSATTFANVFQCSNVGVAISNKLNAVKRVSSVVFPASLSAGVEAVDPHISFKDVSNIQKQNLFISKLNLCCTVYDKNCTEKDVKHQTLVELVDFVSSGSAKFTEPSIAAMCKMCASNLFRVFPPKFRPSATGGETEDEELMFDPSWSHLKIVYDLLLQFINYNALDLKVAKLHIDNAFIVRLLDLFDSEDPRERDCLKTILHRVYGKFMVHRPFIRKCVSNIIYRFVFETERHNGIAELLEIFGSVICGFALPLKEEHTIFLCRVLMPLHKPKSVGSYHQQLTYCVLQFIDKDPTLASTVITGLLKYWPVTNSQKELMFISELEEVLDATIMTEFQKVMVPLFRRIACCLNSYHYQVAERAHLLWNNEHIFDVVSQNREVILPLVFTALIHNTQNHWNRAVLNQTENMRKMLSQMDEELVLACQLKLEEEDSRSSAAAEQRRVTWELLEAAATANIQPIAVAGDVVASPACSVAC 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00622 501 MobiDBLite consensus disorder prediction 1 26 - -
Vian4g00622 501 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vian4g00622 501 Gene3D - 82 476 IPR011989 -
Vian4g00622 501 FunFam Phosphoprotein phosphatase, putative 82 475 - -
Vian4g00622 501 SUPERFAMILY ARM repeat 86 458 IPR016024 -
Vian4g00622 501 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 76 478 IPR002554 GO:0000159|GO:0007165|GO:0019888
Vian4g00622 501 PIRSF PP2A_B56 3 491 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00622 Vian-Chr4 7510732 7513035 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00622 K11584 - gmx:100814349 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00622 4 7510732 7513035 Vian4g00622 4 7510732 7513035 ECH