Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00621 ATGGTTGCAACAGCCGTAACGGCGTCATTTATCCCTGTTGTGCCTTCGCCGGACTCTGGAAAAGGGAAGCAGACGCAGTTGGGTGGTGGGTCTGCGAGCCTGAGAGGACTCCAACCGAGAAATGGTTTATGCGGTGGCTTGCAGGTGAAGGCAAACGCTCATGCCCCTCCGAAGGTTAACGACACCGTGAAGGTTGAGGATGATTTGCCATCTTCATCGTCACTTACTCCTGCTCCGAGGACTTTCATCAACCAGTTACCGGATTGGAGCATGCTTCTCGCTGCCATCACCACCGCCTTCCTAGCTGCGGAGAAGCAGTGGATGATGCTCGATTGGAAGCCGCGCCGGCCCGACATGCTCGTTGACCCCTTTGGGATAGGAAAGATTGTGGAGGACGGGCTTGTGTTCAGGCAGAACTTCTCAATTCGGTCCTACGAAATTGGCGCTGACAAAACCGCGTCTATAGAGACGATGATGAATCATTTGCAGGAGACAGCTCTTAATCATGTTAAGACTGCGGGGCTTCTTGGTGATGGTTTTGGCTCCACGCCTGAAATGTGTAAGAAGAACTTGATTTGGGTGGTTACCAAGATGCAGGTTGTGGTTGATCGGTATCCTAAATGGGGTGATGTTGTTCAAGTCGATACTTGGGTTTCCGCATCAGGAAAGAATGGTATGCGTCGTGATTGGCTTGTGCGTGATGCCCAAACGGGTGAAATCTTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAAGTGACAAGGAAACTGTCTAAAATTCCCGAAGAAGTCAGGGGAGAGATAGGCACTTATTTTGTGGATTCTGCTCCAGTTGTGGAAGAGGATAAAAGAAAACTATCCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTCCTAGATGGAGTGATCTAGATGTTAACCAGCATGTTAACAATGTGAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAACCACTTTTGGAGAGTCATGAGTTATGTGCCATGACTTTGGAGTACAGAAGGGAGTGTGGCAGGAACAGTGTGCTGGATTCCCTGACTGATATATCTGGTGCTAATGTAGGCAGTTTAGCCGACGGTGGACTTTTTGAGTGCAAACACTTGCTTCGACTTGAAGATGGTGCTGAAATTGTGAGAGGTAGGACCGAATGGAGATCCAAGTCTGCAAACAACTTTGGAGTTCTGAGTCAGGTTTCAGCAGAAAGCACCTAA 1245 0.4835 MVATAVTASFIPVVPSPDSGKGKQTQLGGGSASLRGLQPRNGLCGGLQVKANAHAPPKVNDTVKVEDDLPSSSSLTPAPRTFINQLPDWSMLLAAITTAFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVEDGLVFRQNFSIRSYEIGADKTASIETMMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQVVVDRYPKWGDVVQVDTWVSASGKNGMRRDWLVRDAQTGEILTRASSVWVMMNKVTRKLSKIPEEVRGEIGTYFVDSAPVVEEDKRKLSKLDDSANFIRTGLSPRWSDLDVNQHVNNVKYIGWILESAPQPLLESHELCAMTLEYRRECGRNSVLDSLTDISGANVGSLADGGLFECKHLLRLEDGAEIVRGRTEWRSKSANNFGVLSQVSAEST 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00621 414 Gene3D Hotdog Thioesterase 126 402 - -
Vian4g00621 414 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 294 395 IPR029069 -
Vian4g00621 414 Pfam Acyl-ACP thioesterase 133 396 IPR002864 GO:0006633|GO:0016790
Vian4g00621 414 CDD 4HBT 136 252 - -
Vian4g00621 414 Pfam Acyl-ATP thioesterase 1 122 IPR021113 GO:0016790
Vian4g00621 414 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 130 282 IPR029069 -
Vian4g00621 414 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 58 399 IPR045023 GO:0006633|GO:0016297
Vian4g00621 414 FunFam Acyl-[acyl-carrier-protein] hydrolase 127 401 - -
Vian4g00621 414 MobiDBLite consensus disorder prediction 13 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00621 Vian-Chr4 7504269 7507323 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00621 1 399 Acyl Lipid Metabolism Gene Families AT1G08510 71.463 0.0 578
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00621 K10781 - gmx:100781381 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00621 4 7504269 7507323 Vian4g00621 4 7504269 7507323 ECH