Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian4g00613 | ATGGATATGAAGAAAATTGTGGTTGTTGTAGAAGATGTGGATGCAGCAAGAACTGCTCTGCAATGGGCTCTCACAAACATCATTCGCTATGGTGACATAATCACTCTTCTCCATGTCTACCACTCCACAAGATCAAAAAGCAGAAGCAAAGCTCGTGTTCTTCGCCTCAATGGCTTCAAATTGGCACTTTCCTTTCAAGACATGTGCAACAACTACCCCAACACAAAGGTTGAAATTATTGTCACGGAAGGGGACCTCGAAGGAACCAAGATCGCCGCCACGGTGAGAGAGGTTGGAGCTTCCATGCTTGTGGTTGGACTCCATGATTGTAGTTTTCTATACAAATTGACAATGGCCCATTCCCACAATAGCATAGCCAGCATTTTCAACTGCAGAGTACTTGCCATCAAGCAGCCTTGTGTGTCCCCATTGAGGCCCATGATTTCTGCAGTATCAGTGCTGGACAGTTCAACCAACTTGGATGTTTCACTAATTGATCTTTCTAGATTACAAGTCCCTGGTACCCCTCCACCAAAAATTCCATACAGAATCTGTCCTAACCCATCAGCAATTATTTGGAGATCAAGGAAGTCTAGAAGATGGTGA | 606 | 0.4439 | MDMKKIVVVVEDVDAARTALQWALTNIIRYGDIITLLHVYHSTRSKSRSKARVLRLNGFKLALSFQDMCNNYPNTKVEIIVTEGDLEGTKIAATVREVGASMLVVGLHDCSFLYKLTMAHSHNSIASIFNCRVLAIKQPCVSPLRPMISAVSVLDSSTNLDVSLIDLSRLQVPGTPPPKIPYRICPNPSAIIWRSRKSRRW | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian4g00613 | 201 | CDD | USP_Like | 17 | 129 | - | - | |
| Vian4g00613 | 201 | Pfam | Universal stress protein family | 3 | 137 | IPR006016 | - | |
| Vian4g00613 | 201 | Gene3D | HUPs | 1 | 140 | IPR014729 | - | |
| Vian4g00613 | 201 | PANTHER | ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN | 1 | 200 | - | - | |
| Vian4g00613 | 201 | SUPERFAMILY | Adenine nucleotide alpha hydrolases-like | 1 | 138 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian4g00613 | Vian-Chr4 | 7390618 | 7392218 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian4g00613 | - | - | vra:106755935 | 400.979 |