Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00601 ATGGAGAGGCGTTACAATGAACAAGCATACACGTCCAAGAAAATAGACCTCACTCTGAAGCTTTCTCCTTGCGGTGAGAATGCAGAAGAAAGAAGGTTGACAAGGTCATCATCAGTAGAGGGTGAGGCAAGTGGGGTCCAGTGGGACCCATATCTTGGCAGATCTTGTTCGTTGCCAGGAGAGGAGCAGAGGAGCGTGACCTTACCCTCACCTCAAGTGTTTGCCTGGGTGGCTGCTTCTGCTGTCAATGTCAATACATCATCATCACTTCCTCCACTCAAGGCACATCCAATTCCTTCTCAGGCTTCAGAGCTTCAGGGTCTGACAGATTCAGCCAAAGGAGTTGCTTTGAAAATCCAAACTTCAACCGAGGAAGACAACAATTCCATGGCTTCCAAGAAGACAATGACCAAGAAAATTTCTGCTAGGCATGGTGAAACAAAGCTGGAGAATCAGGCAAAAAGGCATAAAGTTGGGAACTACTGCAGTCTTAAAGGTGATGTAATGGAGATCCTGAGCCGGATGCCAAGTGTGAGAGCAACTGGAGATGGCCCTGATGGGAAGAGAATAGAAGGGTTTCTGTACAAGTACAGAAGTGGTGAAGTGTGTATTGTTTGTGTCTGCCATGGAAGTTTCCTCACTCCAGCTGAGTTTGTGAAGCATGCTGGGGCCAAGGAAGTGGCCAATCCCATGAAGCATATCACTGGGTCAGAGAAGAAAACAAAAATCGTCTTCATTCTTAGCTTCTCGAGAATTTGGTTTGGTTCTTTATTTAGCATCTTTGAGGATTTGAATATGATGGTGGCCGAAAACTTAGTGGATGAAGAAGTAATGAAGGAGGAGGAACAAGGCATGACGACGCTAGCAGATGAAGAAGATGGGTGGTGTGCGACTTCCTATTGCAAGCGGATGGCAGCGCTGTGTTGCAAATCCAGTAAGCGGATCCCCATAGCTGAAATCCTGGCTCCGTCGGCAAAGGTCAAGGTGCAGGAATGGTGGCTCCGTCGACAAAGGCGTGGCTGGAGAAAGTGTACATCGGCGTTGGAAGCAGCGGTTGGCGGAAGGTACGCCGGAGAGGATGAAGATGAAGTGGACAGAGATGGTGGAAGTGGTGGTCCGAGAATGCATGGTTTTTTTATCAAGATCTTAGAATTGGAAAGCAACGAAGTACTTCACCGAGGTGAAGAGAGGGTAACCAACCTGAAGGTCAAAAGAGGGATAACTAAGCTGTGA 1233 0.4769 MERRYNEQAYTSKKIDLTLKLSPCGENAEERRLTRSSSVEGEASGVQWDPYLGRSCSLPGEEQRSVTLPSPQVFAWVAASAVNVNTSSSLPPLKAHPIPSQASELQGLTDSAKGVALKIQTSTEEDNNSMASKKTMTKKISARHGETKLENQAKRHKVGNYCSLKGDVMEILSRMPSVRATGDGPDGKRIEGFLYKYRSGEVCIVCVCHGSFLTPAEFVKHAGAKEVANPMKHITGSEKKTKIVFILSFSRIWFGSLFSIFEDLNMMVAENLVDEEVMKEEEQGMTTLADEEDGWCATSYCKRMAALCCKSSKRIPIAEILAPSAKVKVQEWWLRRQRRGWRKCTSALEAAVGGRYAGEDEDEVDRDGGSGGPRMHGFFIKILELESNEVLHRGEERVTNLKVKRGITKL 410
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00601 410 Pfam Tify domain binding domain 204 234 IPR032308 -
Vian4g00601 410 PANTHER AFP HOMOLOG 2 88 235 IPR031307 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00601 Vian-Chr4 7273122 7278416 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00601 - - pvu:PHAVU_009G202000g 337.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00601 4 7273122 7278416 Vian4g00601 4 7273122 7278416 ECH