Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00597 ATGGATGTAGTAAATGATTTTCATATGGGAGGTTCAACCAGTACAGAGGATGTAAATTTGTCACAGAAGCGGAAAACCCCGAAAAGGAAGAAACAAGAATTTAATTCGACAAAGCAGAATGAGAAGAGCAAACGGAAGAAGACAACACATAATCCTATTGAAGGCAATAATAGCGGTTGTGGCACTTCAGAGAATACTTTTTCACCAAAAGCTTCTGTTCCTGCATTGGATATGCAGTCAGGACATCCAATTCAATGTTTTTCCACTGATCCAATAACAAGTCAATCTTGTGAGGAAGTGGGTTTTCGTCAAGGAGGTCACGAAGAAAAGGAGCAGAAGATGATAAATGCAACTGCAGAAAAAGCTTCCTCACCTGCATTGGATATGCTGTCAGGACATCCAATTCAATGTCTTTCCACTGATCCAATAACAAGTCAATCTTGTGAGGAAATGGATTTTTATCAGGGAGATCAAGAAGAAAAGGAGCAGAAGATGATAAGTACAACTGCAGCAAAAGCTTCCATACCTGCATATGATATGCTGTCAGGAAATCCAATTCAATGTTTTTCCACTGATACAATAACAAGTCAGTCTTGTGAGGAAGTGGCTTTTTGTCTGGGAGATCATGAAGAAAAGGAGCAAAAGATGAGCAAAACAACTGCAGCTAAAGCTTCCACTCCTGCATTGGATATGCTGTCAGGACATCCAATTCAATGTTTTTCCACTGATCCAATAACAGGTCAATCTTGTGAGGAAGTGGGTTTTTGTCTGGGAGATCGTGAACAAAAGGAGAAAAAGATGATCAATACAACTGCAGCAAAAGCTTCCTCCCCTGCATTGGATTTGCTCTCGGGACGTCCAATTCAACGCTTTTCCACTGATCCAATAACATGTGAATCTTGTGAGGAAGTGGGTTTTTGTCAGGGAGATCATGAAGAAAAGGAACAGAAGACAATGGATACAACTGCAGAAAAGCAGCATAACGTTTCAGAAGTAAGCTGCAACCACACTTCTGTTGCAGCAAGTCCGGAGCCTTTTTCGAAAGAGTGTGTGCCAGAAGTTGTAAAATTGAGTACTGAGCATAGCATAAATGATAACATTTCCAACCCGGAGGATAAGAATAGTTTTGTAAATGATACAAGTATGATGAAGGAAGATGTTGATGACCCAGCACATTATGAATTGTCCGATATAAACATGTGTTATAAAGCCTGTACAAGGAGACAAATGGTTGATGCTGATTGTAGGAGAAGCAGTGGTGACCATAGTCCTGAAAGTGCTAACAAGGAACCGACTTTTCAGGATCATGACAAGGATCATTCACACCAATTTTCTGATGGATCATTGAGAGTTGGCTTGATGGATGGAGAAACAAAACTTTCATTTGATCAAGTTACCTCACATAGTGGAGCTGCAGCTGAGGAAATAAAGTTGAGCACTGACATCATTGATGAGCAAAGATTTATTACTACTTCTGTTGTAGACATTCCTGTGGAGCATCTCGAAGCGGATGGTAGACAACAGGATGATACAGAGATTACAAGAAGCAATCTGTGTTGTGCAGGTGAGCAAATAGAGTTGAACACCGACAACATTGATGAGGAAAGGTCTATGCCTGCCTCATCTGCAGTTGGCATTCATGCGGAGCAAGTTGAAACTAATGGTAGACAGCTAGATCATGCGGAGATTACAAGAAATGATATGTGTTGTGCAGGTGATGTTTCTGATTTAAGCTTAGACACAGTGAGAGATGGTCATTTAAAGATTTCACAATTCTCACTAGACAGAAGTGGTTTGGGGAACCCAAAGAAGAAGCTTCTCATCCTTGATGTGAATGGACTGCTTGCTGATTTTGTCAGTATCCATGACACTAGAACAAGGTATAGGCGAGAACGAGAGCCAGATTTTATACTGAAAGGGAGAAAAGTCTACAAGAGGCCCTTTTTCGAGAATTTTCTACAGTTTTGCTTGGACAGATTTCATGTAGGAGTATGGTCTTCTAGAGCCAAGTGCAATGTTGATGAAGCAATCAAATTTCTTATGGGGAAATCTGCATCCAAACTTCTCTTTTGTTGGAATCAGTCCCACTGTACTACAACTGAATTCACTACTGTTGAGGATTTACACAAGCCCCTTGTGTTGAAGGAACTTAGAAAATTGTGGGAAAAGGAAGAAGCCGATCTACCATGGGAGAAGGGAGAGTTTAACGAGTCCAACACATTATTATTGGATGACTCCCCTTACAAGGCACTAATGAATCCTATGCATTCAGCTATATTTCCTTATTCTTACCGATACTTCTACACCAGAGACTCAGAATTAGGACCAGAAGGTGATCTTCGGATTTATCTAGAAGGGTTGGCTTTAGCTGAGAATGTAAGAAAGTACGTGTCAGAAAATCCTTTTGGGCAACGGCCGATAAGAGAAGCAAATCCATCATGGGGTTACTACCGTAGAGTTATAGAATCAGTTCAAAAGAAGCGATCAGGCACTGCATTTGTTTAA 2505 0.4064 MDVVNDFHMGGSTSTEDVNLSQKRKTPKRKKQEFNSTKQNEKSKRKKTTHNPIEGNNSGCGTSENTFSPKASVPALDMQSGHPIQCFSTDPITSQSCEEVGFRQGGHEEKEQKMINATAEKASSPALDMLSGHPIQCLSTDPITSQSCEEMDFYQGDQEEKEQKMISTTAAKASIPAYDMLSGNPIQCFSTDTITSQSCEEVAFCLGDHEEKEQKMSKTTAAKASTPALDMLSGHPIQCFSTDPITGQSCEEVGFCLGDREQKEKKMINTTAAKASSPALDLLSGRPIQRFSTDPITCESCEEVGFCQGDHEEKEQKTMDTTAEKQHNVSEVSCNHTSVAASPEPFSKECVPEVVKLSTEHSINDNISNPEDKNSFVNDTSMMKEDVDDPAHYELSDINMCYKACTRRQMVDADCRRSSGDHSPESANKEPTFQDHDKDHSHQFSDGSLRVGLMDGETKLSFDQVTSHSGAAAEEIKLSTDIIDEQRFITTSVVDIPVEHLEADGRQQDDTEITRSNLCCAGEQIELNTDNIDEERSMPASSAVGIHAEQVETNGRQLDHAEITRNDMCCAGDVSDLSLDTVRDGHLKISQFSLDRSGLGNPKKKLLILDVNGLLADFVSIHDTRTRYRREREPDFILKGRKVYKRPFFENFLQFCLDRFHVGVWSSRAKCNVDEAIKFLMGKSASKLLFCWNQSHCTTTEFTTVEDLHKPLVLKELRKLWEKEEADLPWEKGEFNESNTLLLDDSPYKALMNPMHSAIFPYSYRYFYTRDSELGPEGDLRIYLEGLALAENVRKYVSENPFGQRPIREANPSWGYYRRVIESVQKKRSGTAFV 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00597 834 MobiDBLite consensus disorder prediction 1 90 - -
Vian4g00597 834 Pfam NLI interacting factor-like phosphatase 605 794 IPR004274 -
Vian4g00597 834 ProSiteProfiles FCP1 homology domain profile. 600 787 IPR004274 -
Vian4g00597 834 PANTHER DULLARD PROTEIN PHOSPHATASE 373 796 - -
Vian4g00597 834 MobiDBLite consensus disorder prediction 415 445 - -
Vian4g00597 834 SUPERFAMILY HAD-like 600 796 IPR036412 -
Vian4g00597 834 MobiDBLite consensus disorder prediction 52 73 - -
Vian4g00597 834 FunFam Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 560 803 - -
Vian4g00597 834 MobiDBLite consensus disorder prediction 32 51 - -
Vian4g00597 834 Gene3D - 580 802 IPR023214 -
Vian4g00597 834 SMART forpap2 603 771 IPR004274 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00597 Vian-Chr4 7188182 7192029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00597 - - vum:124842253 1355.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00597 4 7188182 7192029 Vian4g00597 4 7188182 7192029 ECH