Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00590 ATGTCGGAAACAGGAGCGACGGCGATTCTGAAGGAGGAGGTGGACATAGTTATCCCCACAATAAGGAACCTGGAGTTCTTGGAGAAGTGGAGAGCGTTCTTTGAGCCTTACCACCTCATAATAGTGCAGGACGGTGACCCTTCTAAGGGCATCAAGGTCCCCGAAGGCTTCGACTACGAACTCTACAACCGTAACGACATCAACCGCATTCTGGGCTCCAAGAGCCACTGCATTTCCTTCAAGGACTCTGCATGCCGCTGCTTCGGCTTCTTGCTCTCCAAGAAGAAGTACATCTTCACCATCGACGATGATTGCTTTGTGGCAAAAGATCCATCTGGGAAAGAAATTAACGCCCTGGAACAGCATCTGAAGAACCTTCTGACTCCATCAACCCCGTTTTTTTTCAACACCCTCTACGATCCTTTTAGAGAGGGTACAGATTTTGTCCGTGGATACCCGTTTAGTCTGCGTGAAGGTGTCCCTACAGCTGCTTCTCATGGCCTCTGGCTCAACATTCCTGATTATGATGCCCCAACTCAGCTTGTCAAACCTCTGGAGAGGAACACCAGGTATGTGGATGCAGTAATGACCATACCAAAGGGAACCCTGTTTCCCATGTGTGGAATGAATCTGGCATTCAACCGTGAATTAATCGGTCCTGTAATGTACTTTGGACTCATGGGTGATGGTCAACCTATCGGACGCTATGATGACATGTGGGCTGGTTGGTGCATGAAGGTGATAAGTGATCATCTGGGATTCGGGGTGAAGACAGGTTTGCCTTACGTCTGGCACAGCAAAGCGAGCAACCCATTTGTAAACCTTAAGAAGGAGTACAAAGGAATTTACTGGCAAGAAGAGCTGATTCCATTTTTCCAATCTGTTTCTCTTCCCAAGGAATGCACTACTGCTCAGAAATGCTACGTTGAACTCTCGAAACAAGTGAAGGCAAAACTTGGGAAGGTTGATGAGTATTTCAACAAGCTTGCAGATAACATGGTAACTTGGATTGAAGCTTGGGAGGAACTAAACCCTTCTGTGGCACCAAAATCTGATGCATTGCCCAATGGCTCTGCCAAGTAA 1083 0.4737 MSETGATAILKEEVDIVIPTIRNLEFLEKWRAFFEPYHLIIVQDGDPSKGIKVPEGFDYELYNRNDINRILGSKSHCISFKDSACRCFGFLLSKKKYIFTIDDDCFVAKDPSGKEINALEQHLKNLLTPSTPFFFNTLYDPFREGTDFVRGYPFSLREGVPTAASHGLWLNIPDYDAPTQLVKPLERNTRYVDAVMTIPKGTLFPMCGMNLAFNRELIGPVMYFGLMGDGQPIGRYDDMWAGWCMKVISDHLGFGVKTGLPYVWHSKASNPFVNLKKEYKGIYWQEELIPFFQSVSLPKECTTAQKCYVELSKQVKAKLGKVDEYFNKLADNMVTWIEAWEELNPSVAPKSDALPNGSAK 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00590 360 PIRSF UPTG 4 348 IPR004901 GO:0016866|GO:0071669
Vian4g00590 360 SUPERFAMILY Nucleotide-diphospho-sugar transferases 14 246 IPR029044 -
Vian4g00590 360 CDD Glyco_tranf_GTA_type 16 110 - -
Vian4g00590 360 Pfam Reversibly glycosylated polypeptide 10 344 IPR037595 -
Vian4g00590 360 PANTHER UDP-ARABINOSE MUTASE 3 346 IPR037595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00590 Vian-Chr4 7107819 7109155 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00590 K13379 - gmx:100816315 702.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00590 4 7107819 7109155 Vian4g00590 4 7107819 7109155 ECH