Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00573 ATGGCGAGAGAGCTTCTCGCACGCAATCTGGGTCAATGGATCTCTGTGTGTTTGCTGTTACTTTTTCATGTCAATTTCGGAACTTGTTTTTACCTTCCTGGTGTTGCACCCGAGGATTTCCACAAGCCTTTGTTAATTAAGATCCTTATTCAGTTTTACAAGTTGGCCAATGATGATATTTATTTTTGCTTGTTGGAACATTCAACGTTGGTTTGTGAGATCCGAGCATTATGGTGGTATCTGGATCGCATTGTTGACAGTGCAGAGAATCTTGGGGAAGTGCTTAGGGGTGACCGCATAGAAAACTCTCCTTACGTGTTCAAAATGAGAGAACCCCAGATGTGCAATGTTGTTTGTCGGCTAATTCTCGACAAAAATTCAGCCAACGAGTTCAAGGAAAAGATAGATGATGAATATCGAGTGAACATGATTTTAGACAATCTTCCTTTGGTTGTCCCACTGAGACGACCTGACCACGAATCATCCTTGGTTTATCTGCATGGCTTCCTCGTTGGCCTTAAAGGGCAGTATGCAGGAGAAAGTAATTTGAAGTGGGCATCTCGCTGGGATTCCTATTTACTGATGGCCGATGATCAAATTCATTGGTTTTCAATTGTTAATTCTTTGATGATTGTACTTTTCCTATCGGGTATGGTGGCTATGATAATGTTGAGGACACTTTACAGAGACATCTCAAAGTACAATCAATTAGAGACACAGGAAGAAGCTCAGGAAGAGTCAGGGTGGAAGCTTGTTCATGGGGATGTTTTCAGGCCTCCTCCCAATTCAGATCTACTATGTGTATATGTTGGAACAGGTGTTCAATTTTTCGGAATGATTCTTGTGACAATGATGTTTGCGGCACTTGGATTCTTGTCTCCCTCAAACAGAGGGGGGTTGATGACTGCAATGCTCTTGCTCTGGGTGCTTATGGGACTGGGTGGAGGCTATTCTTCAGCTCGTCTTTATAAAATGTTCAAGGGACCACAATGGAAGAAAATTGCTCTCAAGACAGCTTTTATGTTTCCTGCCACTGCTTTTTCAATTTTCTTTGTGTTAAACGCTCTAATCTGGGGCCAGAAATCTTCTGGGGCTGTCCCGTTTGGTACAATGTTTGCTCTTGTTTTCTTATGGTTTGGAATCTCAGTTCCACTGGTGTTTCTTGGTGGTCACTTTGGCTCTAAAATGCCAATGGCTGAGGATCCTGTGAAGACAAACAAGATTGCTAGGCAGATCCCAGATCAGCCTTGGTACATGAATCCAACGTTTTCTGTTCTGATAGGAGGCGTGCTTCCGTTTGGTGCTGTCTTCATTGAGCTTTTCTTCATTCTCACATCAATCTGGTTACATCAGTTTTATTACATATTTGGTTTCCTGTTCATTGTGTTCATCATCCTCATTGTTACTTGTGCTGAGATCACAATAGTTCTCTGCTACTTCCAGCTGTGTGGTGAGGACTACCGTTGGTGGTGGAGGTCATATCTCACTTCTGGTTCCTCTGCACTCTACCTTTTCCTCTATGCTGCATTTTACTTTTTCACAAAGCTTGAGATCACAAAACCAGTATCTGGAGTCTTGTATTTTGGATACATGCTGCTTCTTTCCTATGGATTCTTCGTGGTTACTGGTACAATTGGTTTCTATTCATGCTTCTGGTTCATAAAACTAATCTACTCATCAGTTAAAATTGACTGA 1695 0.4201 MARELLARNLGQWISVCLLLLFHVNFGTCFYLPGVAPEDFHKPLLIKILIQFYKLANDDIYFCLLEHSTLVCEIRALWWYLDRIVDSAENLGEVLRGDRIENSPYVFKMREPQMCNVVCRLILDKNSANEFKEKIDDEYRVNMILDNLPLVVPLRRPDHESSLVYLHGFLVGLKGQYAGESNLKWASRWDSYLLMADDQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISKYNQLETQEEAQEESGWKLVHGDVFRPPPNSDLLCVYVGTGVQFFGMILVTMMFAALGFLSPSNRGGLMTAMLLLWVLMGLGGGYSSARLYKMFKGPQWKKIALKTAFMFPATAFSIFFVLNALIWGQKSSGAVPFGTMFALVFLWFGISVPLVFLGGHFGSKMPMAEDPVKTNKIARQIPDQPWYMNPTFSVLIGGVLPFGAVFIELFFILTSIWLHQFYYIFGFLFIVFIILIVTCAEITIVLCYFQLCGEDYRWWWRSYLTSGSSALYLFLYAAFYFFTKLEITKPVSGVLYFGYMLLLSYGFFVVTGTIGFYSCFWFIKLIYSSVKID 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00573 564 PANTHER TRANSMEMBRANE 9 SUPERFAMILY PROTEIN 29 176 IPR004240 GO:0016020
Vian4g00573 564 Pfam Endomembrane protein 70 180 520 IPR004240 GO:0016020
Vian4g00573 564 Pfam Endomembrane protein 70 87 176 IPR004240 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00573 Vian-Chr4 6826814 6829841 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00573 180 564 Miscellaneous Gene Families AT3G13772 81.299 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00573 K17086 - cpap:110815759 832.017
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00573 4 6826814 6829841 Vian4g00573 4 6826814 6829841 ECH