Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00468 ATGGAAGGAGGTGTGCCTGAGGCTGATATCTCAGCTTTCAGAGAATGTTTATCTCTTTCATGGAAAAACCCTTACGTTCTTCGCCTTGCTTTCTCTGCTGGAATCGGTGGTCTTCTCTTTGGTTATGACACTGGAGTTATATCTGGGGCTCTGTTGTATATCAGAGATGAATTCAAAGAAGTGGATAGAAAAACTTGGCTTCAGGAAGCCATAGTGAGTACTGCAATTGCTGGAGCAATCATCGGGGCTTCAGTTGGAGGATGGATCAACGATCGATTTGGAAGAAAGAAAGGAATTGTTCTAGCAGATATCCTCTTTTTTGTTGGGTCTGCTATTATGGCTGCTGCGAAAAGCCCAGCTGTTCTCATTGTGGGTCGTGTGTTCGTTGGCATTGGTGTTGGTATGGCTTCAATGGCATCGCCCCTCTACATTTCAGAGGCTTCACCAACCCGAGTAAGAGGAGCCCTTGTGAGTCTCAACAGTTTTCTCATCACTGGAGGACAGTTCCTTTCATACCTCATCAACTTGGCCTTCACCAAGGTGGGAAACTGTGCTGTCACTTTTCACTTTCTTACAAATTTTTCAGACATGCCTGATCTATGCACCAGGGACATGGAGGTGGATGTTAGGGGTAGCAGCAGCACCAGCTTTGGTTCAAGTTGTATTAATGTTGACACTCCCAGAATCACCTCGTTGGCTGGTAGGGAAGAGGAGGCAAAAGCAATTCTGAAAAAGATTTACCCGCCTAGCGAAGTTGAAAGTGAAATTCAGGCTTTGAAGGAATCAGTTGATATGGAAATTAAGGAATCATCAGAGAATGTCAGCTTGATCAAACTGTTGAGAACCCCAGCTGTGAGAAGAGGTTTATATGCAGGCATGGGTCTTCTAATCTTCCAGCAGTTTGTGGGGATCAACACTGTGATGTACTACAGCCCCACCATTGTTCAGTTAGCTGGTTTTGCATCTAACAGAACAGCACTGCTTCTGTCACTCATCATAGCTGGTCTGAATGCATTTGGTTCAATTGTGAGTATATACTTTATTGACAAGACTGGGAGGAAAAAGCTTGCTCTGATCAGTTTGTGTGGAGTTGTGTTCTCCCTGGCTATGCTAACTGTCTCTTTTCGAGAAAGTGAAATTCATGCTCCAATGGTGAGTGCCATTGGAACCTCTCAGTTCAACAACACATGTCCTGATTACAAAGCAGCTCTGAACCCTAATGAATGGAGTTGCATGACATGCCTAAAGGCTTCACCATCTTGTGGTTTTTGTGCTGCCGATGACAAGCTTTTACCCGGGGCATGTCTGATCTCCAATGTTATCACAAAGAATTTGTGTGGCAGTGATCATAGGGCATGGTACACTAGGGGGTGTCCTAGCAAATATGGTTGGACCGCCTTAGTAGGCCTTGCGCTTTACATAATTTTCTTCTCACCTGGGATGGGAACTGTTCCATGGGTTGTGAACTCTGAAATCTATCCCTTGAGGTACAGAGGAATCTGTGGAGGAATGGCATCAACAACTGTTTGGATTTCCAACCTCATTGTTTCAGAATCCTTTTTGTCCTTGACAGAAGCTATTGGGACAGCGTGGACATTCATGATGTTTGGAATTGTAGCCGTTGTGGCCATTTTCTTTGTCGTTATATATGTACCTGAGACCAAAGGGGTTCCAATGGAAGAAGTGGAGAAGATGCTGGAACAAAGATCATTGCAGTTTAAGTTTTGGCAGAAGAGATATTCTGGCACTGAGAAGCACTGA 1761 0.4446 MEGGVPEADISAFRECLSLSWKNPYVLRLAFSAGIGGLLFGYDTGVISGALLYIRDEFKEVDRKTWLQEAIVSTAIAGAIIGASVGGWINDRFGRKKGIVLADILFFVGSAIMAAAKSPAVLIVGRVFVGIGVGMASMASPLYISEASPTRVRGALVSLNSFLITGGQFLSYLINLAFTKVGNCAVTFHFLTNFSDMPDLCTRDMEVDVRGSSSTSFGSSCINVDTPRITSLAGREEEAKAILKKIYPPSEVESEIQALKESVDMEIKESSENVSLIKLLRTPAVRRGLYAGMGLLIFQQFVGINTVMYYSPTIVQLAGFASNRTALLLSLIIAGLNAFGSIVSIYFIDKTGRKKLALISLCGVVFSLAMLTVSFRESEIHAPMVSAIGTSQFNNTCPDYKAALNPNEWSCMTCLKASPSCGFCAADDKLLPGACLISNVITKNLCGSDHRAWYTRGCPSKYGWTALVGLALYIIFFSPGMGTVPWVVNSEIYPLRYRGICGGMASTTVWISNLIVSESFLSLTEAIGTAWTFMMFGIVAVVAIFFVVIYVPETKGVPMEEVEKMLEQRSLQFKFWQKRYSGTEKH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00468 586 FunFam Probable inositol transporter 2 435 574 - -
Vian4g00468 586 Gene3D MFS general substrate transporter like domains 433 574 IPR036259 -
Vian4g00468 586 ProSiteProfiles Major facilitator superfamily (MFS) profile. 29 555 IPR020846 GO:0022857
Vian4g00468 586 SUPERFAMILY MFS general substrate transporter 18 564 IPR036259 -
Vian4g00468 586 PANTHER PROTON MYO-INOSITOL COTRANSPORTER 12 578 - -
Vian4g00468 586 PRINTS Sugar transporter signature 299 309 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g00468 586 PRINTS Sugar transporter signature 37 47 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g00468 586 PRINTS Sugar transporter signature 490 502 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g00468 586 PRINTS Sugar transporter signature 123 142 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g00468 586 PRINTS Sugar transporter signature 467 488 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vian4g00468 586 FunFam Probable inositol transporter 2 20 396 - -
Vian4g00468 586 Gene3D MFS general substrate transporter like domains 20 395 IPR036259 -
Vian4g00468 586 ProSitePatterns Sugar transport proteins signature 2. 128 153 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vian4g00468 586 Pfam Sugar (and other) transporter 462 565 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vian4g00468 586 Pfam Sugar (and other) transporter 30 375 IPR005828 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00468 Vian-Chr4 5498535 5503156 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00468 1 586 Organic Solute Cotransporters AT1G30220 64.924 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00468 K08150 - gmx:100796800 925.62