Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00466 ATGGCAACCACTGCAATGACCACTCTCCCCCAATTCACTGGTCTCAGACCCCAATTCTCAGCTGCCCCTGTGCAGAACTTGGTTGCTGTCCAACCCATGAGGCGCAAGGGGAAGGGTGGTCTGGGAGTTCGATGTGACTACATTGGTTCATCCACTAATCTGATTATGGTGGCTTCTACAAGCCTGATGCTGTTTGCTGGAAGGTTTGGATTGGCTCCATCAGCGAACAGGAAAGCCACTGCAGGGCTAAAGCTGGAGGTGAGGGACTCAGGCTTGCAGACTGGTGACCCTGCTGGGTTCACTCTTGCAGACACCTTGGCCTGTGGTGCTGTCGGCCACATCATTGGAGTTGGGGTTGTTCTTGGTCTCAAGAACATTGGTGCCCTTTAA 390 0.5333 MATTAMTTLPQFTGLRPQFSAAPVQNLVAVQPMRRKGKGGLGVRCDYIGSSTNLIMVASTSLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGAVGHIIGVGVVLGLKNIGAL 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00466 129 PANTHER PHOTOSYSTEM I REACTION CENTER SUBUNIT V, CHLOROPLASTIC-RELATED 2 128 IPR016370 -
Vian4g00466 129 NCBIfam photosystem I reaction center PsaK 47 129 IPR017493 -
Vian4g00466 129 PIRSF PsaK 1 129 IPR016370 -
Vian4g00466 129 Gene3D - 46 129 IPR023618 GO:0009522|GO:0015979
Vian4g00466 129 FunFam Photosystem I reaction center subunit psaK 46 129 - -
Vian4g00466 129 SUPERFAMILY Photosystem I reaction center subunit X, PsaK 97 123 IPR035982 GO:0009522|GO:0015979|GO:0016020
Vian4g00466 129 Pfam Photosystem I psaG / psaK 51 127 IPR000549 GO:0009522|GO:0015979|GO:0016020
Vian4g00466 129 ProSitePatterns Photosystem I psaG and psaK proteins signature. 99 116 IPR000549 GO:0009522|GO:0015979|GO:0016020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00466 K02698 - gmx:100527056 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00466 4 5485223 5486215 Vian4g00466 4 5485223 5486215 ECH