Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00463 ATGGCCTGCGTGAAACTGGGTTCCAAAGCTGATGCTTTTCAGCGTCAAGGGCAGGCCTGGTTCTGTACGACTGGGCTTCCTAGTGATATAGTTGTTGAAGTTGGAGAGATGTCCTTCCATCTTCACAAGTTTCCTTTGCTCTCTAGAAGTGGGGTTCTGGAAAGAATGATCGCCGAGGCTCCTGAATCAGAGGAAGAATGCGCAATATCACTCGGTGACATTCCTGGTGGTGCCAAAACATTTGAACTCGTGGCAAAATTCTGCTATGGGGTGAAACTTGAACTTACAGCATCAAATGTTGTGTACCTGTGGTGTGCTGCAGAGCGTCTAGAAATGACTGAGGAATATGGTGAAGGTAATCTAATTTCACAAGCTGAAACCTTTTTCAATCAAGTGGTCCTCCGCAGTTGGAAAGACTCTCTGAGGGCACTTGAAACCTGTAATGATGTTTTGGCCCATGCTGAAGAGCTCCACATTGTGAAAAGATGCATCGAGTCACTAGCAGCAAAGGCATCTACTGACCCAAATTTATTTGGGTGGCCGGTGCTGGAGCGTGGTGGTCCTCTGCAGAGCCCTGGTGGTAGTGTTTTGTGGAATGGAATAAGTACTGGTGCAAGACCGAAAAATTCAAGTGCAGATTGGTGGTATGAGGATGTATCAAATTTGAGTTTACCACTTTATAAGAGATTAGTAGCTGTCATGGAATCGCGAGGCATTAGGCAGGAGATTATTGCTGGTTCTCTTGCTTTCTATGCTAAAACATATCTGCCTATGTTAAACCGACGCCAGGTTTCCGGTGAGTCCAGCACCCGGCTGACACAGGGAGCCATGGGGTCTCCACTGTCTGAAGATGACCAGAAGATTCTACTGGAAGAGATTGATGGTTTGCTCCCTATGCAGAAGGGCCTGGTCCAAACAAAGTTCTTGTTTGGTCTACTTCGAACGGCCATGATTCTACGGGTGAGCCCTTCTTGCATATCTAATTTGGAGAAACGGATCGGCATGCAGCTTGACCAAGCTACTCTAGAGGATCTCTTAATGCCAAATTTCTCGTACTCCATGGAGACACTTTACAATGTTGACTGTGTGCAAAGAATTCTTGACCATTTCCTTGCCATGGATCAGGCTACTGGCTGTGCCTCTCCATGCTCGATCGACGATGGTCAATTGATTGGATCACCTTCATTAACACCAATCACCATGGTAGCCAAGTTGATTGATGGTTACCTTGCAGAGGTTGCCCCAGATATCAATTTAAAACTTCCAAAGTTTCAGGCCCTTGCCGCAGCTGTTCCAGAGTATGCTAGGCCTTTGGATGATGGTTTATATCGTGCATTAGATATTTACTTGAAGTCTCACCCATGGTTGGTGGAGTCTGAGAGAGAGCAGCTATGTAGGCTGATGGATTGCCAGAAGCTCTCATTAGAGGCATGCACGCACGCGGCGCAGAACGAGAGGCTACCTATCAGAATAATTTTTCAAGTTCTATTTTTTGAGCAGCTCCAGCTTCGAACTTCGATAGCCGGTTGCTTTCTAGTTTCAGATAATCTGGATGGATCGAGGCAGCTGAGAAGCGGGCTTGTGGGATCAACGGACGGTGGCTGGGCGTCAGCGGTGAAGGAAAATCAGGTTTTGAAAGTGGGAATGGATAACATGAGGATGAGGGTGTCTGAGCTGGAGAAGGAGTGTTCAAACATGAGGCAGGAGATTGAGAAATTGGGTCGTTCAAAGGGATCAAGCGCATGGGGAACTGTTTCTAAGAAACTTGGGTTCAAGATGAAGTCTCAGATGTGTAGTGCTCAAGAAGGGTCAGTTAGCAACCAGAACAACAATGGAAATAGTAAGGTTGAGAAGTTGAAGGAAAGACATGTAAAGCACAAGAAAAGTTCTTCTATCAGTGACAAGGCATCAGTGTCTTCAATTGTTCATTCATAG 1935 0.4615 MACVKLGSKADAFQRQGQAWFCTTGLPSDIVVEVGEMSFHLHKFPLLSRSGVLERMIAEAPESEEECAISLGDIPGGAKTFELVAKFCYGVKLELTASNVVYLWCAAERLEMTEEYGEGNLISQAETFFNQVVLRSWKDSLRALETCNDVLAHAEELHIVKRCIESLAAKASTDPNLFGWPVLERGGPLQSPGGSVLWNGISTGARPKNSSADWWYEDVSNLSLPLYKRLVAVMESRGIRQEIIAGSLAFYAKTYLPMLNRRQVSGESSTRLTQGAMGSPLSEDDQKILLEEIDGLLPMQKGLVQTKFLFGLLRTAMILRVSPSCISNLEKRIGMQLDQATLEDLLMPNFSYSMETLYNVDCVQRILDHFLAMDQATGCASPCSIDDGQLIGSPSLTPITMVAKLIDGYLAEVAPDINLKLPKFQALAAAVPEYARPLDDGLYRALDIYLKSHPWLVESEREQLCRLMDCQKLSLEACTHAAQNERLPIRIIFQVLFFEQLQLRTSIAGCFLVSDNLDGSRQLRSGLVGSTDGGWASAVKENQVLKVGMDNMRMRVSELEKECSNMRQEIEKLGRSKGSSAWGTVSKKLGFKMKSQMCSAQEGSVSNQNNNGNSKVEKLKERHVKHKKSSSISDKASVSSIVHS 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00463 644 CDD BTB_POZ_NPY3-like 19 122 - -
Vian4g00463 644 ProSiteProfiles BTB domain profile. 28 97 IPR000210 GO:0005515
Vian4g00463 644 MobiDBLite consensus disorder prediction 600 614 - -
Vian4g00463 644 Pfam BTB/POZ domain 27 113 IPR000210 GO:0005515
Vian4g00463 644 PANTHER OS12G0117600 PROTEIN 22 610 IPR043454 -
Vian4g00463 644 Pfam NPH3 family 213 478 IPR027356 -
Vian4g00463 644 SUPERFAMILY POZ domain 16 114 IPR011333 -
Vian4g00463 644 Gene3D Potassium Channel Kv1.1; Chain A 14 116 IPR011333 -
Vian4g00463 644 ProSiteProfiles NPH3 domain profile. 213 502 IPR027356 -
Vian4g00463 644 Coils Coil 542 576 - -
Vian4g00463 644 MobiDBLite consensus disorder prediction 600 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00463 Vian-Chr4 5435066 5438582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00463 8 632 EF-hand Containing Proteins AT3G44820 46.319 0.0 569
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00463 - - gmx:100779836 1191.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00463 4 5435066 5438582 Vian4g00463 4 5435066 5438582 ECH