Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00446 ATGGAAGGAGGAGGAGGAGTGCGAAAGAGAAGTTGTTGCACGATTCAGAAAAATGACTTCCTCCCGGAGGAATCGTTCAAGAGCTGGGAGAACTACACGACGGCGCTGCTGGATACGCCGAGGAGACTGAAGGACCGATTTCTCACGCGATCCAGCGAGCGAGCGGAGATCAGCGAGATGACGACGCGAAGCAGCCACCAGATGAAGAAGACGCTCAACTGGTGGGACCTCATCTGGCTCGGCGTCGGCTCCGTCATTGGCGCCGGAATATTCGTCCTCACCGGATTGGAGGCTAGGAACGCCGCCGGTCCCGCCGTCATCTTGTCGTACGTCGTGTCCGGTTTCTCCGCCATGCTGTCCGTTTTCTGTTACACCGAGTTTGCCGTCGAAATCCCTGTTGCCGGTGGTTCATTTGCCTACTTAAGAGTGGAGCTAGGAGACTTTGTAGCCTTCGTAGCTGCAGGAAACATCCTTCTTGAGTACGTGATAAGTTGTGCCGCAGTAGCAAGGTCATGGACCTCATACTTCGCCACCCTCTGCAACAAAAACCCTGATGATTTTCGCATAGTCATGCATAACATGAACCCTGATTATGGCCACCTTGACCCTATAGCTGTCGTGATCCTTGCACTCGTATGCATCCTTGCGGTTTGCAGCACCAAAGGCTCTTCAATCTTCAACTACGTTGCCTCAGTCGTACACACAGTCATCCTTGTCTTCATAGTCATAGCAGGTCTTATCCATGCCAAGCCTCAAAACTACGTACCCTTTACACCCTTCGGTGTTAGGGGCGTCTTCCAAGCTTCAGCTGTGCTCTACTTTGCTTATGTCGGGTTCGATGCTGTTGCAACCATGGCTGAAGAAACCAAGAACCCTTCAAGGGACATTCCAATTGGGCTTGTGGGTTCAATGGTGATAGCCACATCGGCATATTGCTTGCTTGCAGCCACACTGTGCCTCATGCAACCGTATACCAATATTGACGTGGATGCACCCTTTTCGGTTGCGTTCAGTGCCGTAGGGTGGGATTGGGCTAAGTACATTGTTTCATTGGGGGCTTTGCAGGGAATGACCACAGTGTTGTTGGTGACTGCTGTGGGTCAAGCTCGGTATCTGACTCACATTTCACGTACACACATGCTGCCTCCTTGGTTTGCTTTGGTGAATGAGCGCACTGGGACACCTGTGAATGCCACAATTTCCCTGGTTCTGATCTCAGCTGTGATTGGTTTCTTCACTGAACTTGAGGTTCTCTCTAACCTCTTGTCAATTTCCACTCTCTTCATCTTCACGTTGGTGGCAGTTGCTCTCCTTGTGCGTAGGTACTACTCCAGTGGAGTCACAACAAAGGGGAACCAAATCAAGCTCATTGTGTTCATTGTGGTGATCATCGGCTCTTCATGTGGGATTTCATCTTATTGGGCACTAAGTGATGGTTGGGTTGGTTATGCTATTCTTTGTCCAATTTGGATTTTGGCTACAGGAGGACTTTGGTTTATGGTTCCACAGGCAAAGGAGCCAAAACTTTGGGGGGTGCCTTTGGTTCCATGGCTACCTTCCATATCTATTTTTGTTAACATATTCCTTCTTGGATCTATGGATAAAGATTCGTTTGCTAGGTTTTGTATTTGGACTGTGCTTCTCTTGGTTTACTATGTCCTCTTCGGGTTGCATGCTTCTTATGACACAGCTAAGGAGTTTGAGGCACAGCGTTGTGCCCAAAGGGAGCTGAACAGGTTGGAAGATGGGGTCGTCTCTTCTACGTAG 1767 0.4963 MEGGGGVRKRSCCTIQKNDFLPEESFKSWENYTTALLDTPRRLKDRFLTRSSERAEISEMTTRSSHQMKKTLNWWDLIWLGVGSVIGAGIFVLTGLEARNAAGPAVILSYVVSGFSAMLSVFCYTEFAVEIPVAGGSFAYLRVELGDFVAFVAAGNILLEYVISCAAVARSWTSYFATLCNKNPDDFRIVMHNMNPDYGHLDPIAVVILALVCILAVCSTKGSSIFNYVASVVHTVILVFIVIAGLIHAKPQNYVPFTPFGVRGVFQASAVLYFAYVGFDAVATMAEETKNPSRDIPIGLVGSMVIATSAYCLLAATLCLMQPYTNIDVDAPFSVAFSAVGWDWAKYIVSLGALQGMTTVLLVTAVGQARYLTHISRTHMLPPWFALVNERTGTPVNATISLVLISAVIGFFTELEVLSNLLSISTLFIFTLVAVALLVRRYYSSGVTTKGNQIKLIVFIVVIIGSSCGISSYWALSDGWVGYAILCPIWILATGGLWFMVPQAKEPKLWGVPLVPWLPSISIFVNIFLLGSMDKDSFARFCIWTVLLLVYYVLFGLHASYDTAKEFEAQRCAQRELNRLEDGVVSST 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00446 588 FunFam Cationic amino acid transporter 5 66 500 - -
Vian4g00446 588 Pfam Amino acid permease 72 452 IPR002293 GO:0016020|GO:0022857|GO:0055085
Vian4g00446 588 Gene3D Amino acid/polyamine transporter I 66 503 - -
Vian4g00446 588 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 47 561 - -
Vian4g00446 588 Pfam C-terminus of AA_permease 510 560 IPR029485 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00446 Vian-Chr4 5186976 5189715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00446 1 566 Organic Solute Cotransporters AT2G34960 57.570 0.0 672
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00446 K03294 - gmx:100785573 970.689
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00446 4 5186976 5189715 Vian4g00446 4 5186976 5189715 ECH