Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00441 ATGAACATCTTCAAGAAGAAAACCTCACCCAAAGAAGCTCTGCGTTCAAGTAAGAGGGAAATGGCTGTTGCAACCAGAGGAATTGAAAGAGAGATAACATCACTTCAGATGGAGGAAAAAAAATTGGTGGCAGAAATTAAGAGAGAAGCAAAAACTGGAAACGAAGCTGCCACCAGAATCTTAGCTCGTCAACTTGTTAGGTTACGTCAACAGATAACCAATTTGCAGGGAAGTCGTGCGCAGATCAGGGGTGTAGCAACTCACACACAGGCATTATATGCAAGCACTTCAATCTCCACAGGAATGAAGGGTGCAACTAAAGCAATGGTGGCAATGAATAAGCAAATGGCACCGGCAAAACAGGTGAAAGTGATCAGAGAATTCCAAAAGCAATCAGCCCAATTGGACATGACGATTGAGATGATGTCAGAATCTATTGATGAAACTTTAGACAAAGATGAAGCCGAAGAAGAAACCGAAGAGCTCACCAACCAGGTTCTTGATGAGATTGGAGTGGATATTGCATCCCAGTTATCTTCTGCTCCGAAAGGACGAATTGCTTCAAGGAATACTGAAAATGTTGCTCCAAGATCAGAAGAATCCCAAGATGTTGAAGAACTTGAAAAGAGATTGGCATCTCTTCGAAGAATATAA 654 0.419 MNIFKKKTSPKEALRSSKREMAVATRGIEREITSLQMEEKKLVAEIKREAKTGNEAATRILARQLVRLRQQITNLQGSRAQIRGVATHTQALYASTSISTGMKGATKAMVAMNKQMAPAKQVKVIREFQKQSAQLDMTIEMMSESIDETLDKDEAEEETEELTNQVLDEIGVDIASQLSSAPKGRIASRNTENVAPRSEESQDVEELEKRLASLRRI 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00441 217 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 215 IPR005024 GO:0007034
Vian4g00441 217 Coils Coil 145 165 - -
Vian4g00441 217 Gene3D - 4 181 - -
Vian4g00441 217 MobiDBLite consensus disorder prediction 180 206 - -
Vian4g00441 217 MobiDBLite consensus disorder prediction 181 195 - -
Vian4g00441 217 Coils Coil 197 217 - -
Vian4g00441 217 Pfam Snf7 18 185 IPR005024 GO:0007034
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00441 Vian-Chr4 5081506 5091674 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00441 K12191 - gmx:100777179 374.4