Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00440 ATGAGCAGCACCATCACAGCAGATATAGTTTTGACAGAGGTTTGCAGAATGGCCTTAGAAAATGGAGAGAAAGTTGAGGTTGGTTTGAGTGTAGTTGCAGAGGCAAAGGCAAAGAAGAAGGATTGGGTTGTTTTGTCCCTCAGAGTGGTTGCGTTTTTTGCCACTGCATCTGCAACACTTGTCATGGCTCTCAACAAACAGACCAAAAGCTTCGTAGTTGCCAACGTTGGTAACTCTCCGATAACAGCAACTCTTGCTGCAAAGTTTAACCAAACTCCGGCTTTTGTGTTCTTTGTTGTAGCAAATGCAAATGCAAGTCTGCATAATTTGGTGATGATAGCAATGGATGTATTAGGACCCCAATATGACTACAAAGGACTCAGGCTTCTGTTCATTGCCATATTAGACATGATGGCTATGGCTCTGGCATCAGCTGGTGATGGTGCAGCAACATTCATGTCAGAATTGGGAAAAAATGGTAATTCACATGCAAGATGGGATAAGATATGTGACAAATTTCAAACCTATTGCAACAGAAGTGGTGCTGCCCTTGTTGTCTCTTTCATTGGCTTCATTCTTCTCCTCATTATTTCAGTCATGTCCATCATCAAATTGCTCAAGCCAAATCGCATTAACCATGCTTCTCCATAG 651 0.4224 MSSTITADIVLTEVCRMALENGEKVEVGLSVVAEAKAKKKDWVVLSLRVVAFFATASATLVMALNKQTKSFVVANVGNSPITATLAAKFNQTPAFVFFVVANANASLHNLVMIAMDVLGPQYDYKGLRLLFIAILDMMAMALASAGDGAATFMSELGKNGNSHARWDKICDKFQTYCNRSGAALVVSFIGFILLLIISVMSIIKLLKPNRINHASP 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00440 216 PANTHER CASP-LIKE PROTEIN 1U1 36 205 IPR044173 -
Vian4g00440 216 Pfam Casparian strip membrane protein domain 39 193 IPR006702 -
Vian4g00440 216 NCBIfam plant integral membrane protein TIGR01569 45 205 IPR006459 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00440 Vian-Chr4 5073733 5075636 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00440 - - gmx:100792043 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00440 4 5073733 5075636 Vian4g00440 4 5073733 5075636 ECH