Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00437 ATGGCGGCTTCTGATCCCAACAAGTTGCTAGCCAAAGCTGATAAGCTAACAACACTCAGTCTCACGAGGTGGAGTGCGGATTGGAAAAGTGCTACTGCTCTTTATGAGCAGGCAGCTAATGGGTTTCGAGTTGCCAGGAACCATGAGAAAGCCAAAATAGCATATGAGAAAGCTTCAAAAGGACAAGAGATGCTTTCATCACCTTGGGATGCAGCTAAGCACATGGAATCTGCCGCAGCTTTGGGAAAGGATCTAAGTAATTGGCAGGAAGTTGGGGACTTCTATCGAAAGGCATCTGAATTGTACATGGAGTGTGGGAGACCACAACCTGCATCAGATGCCCTTGCAAAGGCAGCCCGTGCTTTGGAAGATAGCATGCCTGAAGAAGCGATTCAGCTATATACAGATGCTTGTACAGCTCTTGAAGACGATGGAAGAGAACAAATGGCCTTTGACCTATATCGTGCTGCTGCTAATGTTTATATAAAACTTCAAAAATATACAGATGCAGCATCTTTCATGTTGAGATTGGGCTTGGCAGCTGACAAGTGTAATGCTACCAATAGCCAGAGCAAGGCGTATCTCAGTGCAATTGTTATCTACCTTTATGCTGATGACTTTAAGCAAGCTGAGAAGTGCTATAATGACTGTTCTCAGGTTGATGCTTTTCTCAGAAGTGACCAGAATCGTTGTGCTAGCAAGCTACTTGCTGCCTACACAGATGGGGATGTTGAAGAAATCAAACGTATTGCTCAGTCGAGTGGTATTTCACATCTTGACCATGTGGTTACCAGAGCCAAAGTAAATGTATGGGGGAAACAGCTGATACCTGTTGTCTACTCTCGCAATTCTGAGGAATACGGCCGTCCTATGTTCCAAGGTGCCTCGCCCATGGAGCACAATGCATCTGTAAACTACTTTGATGATGACTCAGTTCAACATTTCTTCTCGTACTGGTTCACACAATCTATCATTAGGCTTGCGAGGAAACTTCCAACAGGTGACGTGAATGCATTAAAGGCTAAGAATGCTGCTGAAGAAGATGACCTCGATGAAGACGATCTGACTTAA 1071 0.4463 MAASDPNKLLAKADKLTTLSLTRWSADWKSATALYEQAANGFRVARNHEKAKIAYEKASKGQEMLSSPWDAAKHMESAAALGKDLSNWQEVGDFYRKASELYMECGRPQPASDALAKAARALEDSMPEEAIQLYTDACTALEDDGREQMAFDLYRAAANVYIKLQKYTDAASFMLRLGLAADKCNATNSQSKAYLSAIVIYLYADDFKQAEKCYNDCSQVDAFLRSDQNRCASKLLAAYTDGDVEEIKRIAQSSGISHLDHVVTRAKVNVWGKQLIPVVYSRNSEEYGRPMFQGASPMEHNASVNYFDDDSVQHFFSYWFTQSIIRLARKLPTGDVNALKAKNAAEEDDLDEDDLT 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00437 356 Pfam Soluble NSF attachment protein, SNAP 5 261 - -
Vian4g00437 356 FunFam Gamma-soluble NSF attachment protein 3 270 - -
Vian4g00437 356 SUPERFAMILY TPR-like 7 249 IPR011990 GO:0005515
Vian4g00437 356 Gene3D Tetratricopeptide repeat domain 2 269 IPR011990 GO:0005515
Vian4g00437 356 PANTHER SOLUBLE NSF ATTACHMENT PROTEIN SNAP 1 266 IPR000744 GO:0006886
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00437 K21198 - gmx:100776112 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00437 4 5037292 5044568 Vian4g00437 4 5037292 5044568 ECH