Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00412 ATGGAGGATCAGCCATCATCATCATCATCATCATCATCAAAATCAAAAACTGCTGCTTTGGATCAACCCCTTCACTTAATGGGGTTTGAAATTGAAGTATTATCACCACAAAAAGTCTCTGGCCGGCTCCCTGTAACCCAGAAGTGCTGCCAGCCATTTAAGGTGCTTCATGGAGGGGTTTCAGCATTGATAGCAGAGTCTTTGGCAAGCATGGGAGCACACATGGCTTCAGGGTATAAAAGAGTGGCTGGAATTCAACTCAGCATCAACCATTTGAAACGAGCTGAGATGGGTGATTTGGTGCACGCAGAAGCTAAACCTTTAAATGTTGGCAAAACAATTCAGGTATGGGAGGTGCTACTATGGAAGATTGATCCTTCAGACTCACAAAGAAGATCCTTGGTCTCATCTTCTAGAGTAACTCTAGTAACCAATATGCCTGTCCCAGTTAATGCAAAAGATGCTGCCGATCCATTAAAGAAGTTTGCAAAACTGTAA 498 0.4317 MEDQPSSSSSSSSKSKTAALDQPLHLMGFEIEVLSPQKVSGRLPVTQKCCQPFKVLHGGVSALIAESLASMGAHMASGYKRVAGIQLSINHLKRAEMGDLVHAEAKPLNVGKTIQVWEVLLWKIDPSDSQRRSLVSSSRVTLVTNMPVPVNAKDAADPLKKFAKL 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00412 165 FunFam 14-dihydroxy-2-naphthoyl-CoA thioesterase 1 10 145 - -
Vian4g00412 165 NCBIfam hotdog fold thioesterase 25 119 IPR003736 -
Vian4g00412 165 PANTHER 1,4-DIHYDROXY-2-NAPHTHOYL-COA THIOESTERASE 1 5 164 - -
Vian4g00412 165 Pfam Thioesterase superfamily 54 125 IPR006683 -
Vian4g00412 165 CDD PaaI_thioesterase 26 122 - -
Vian4g00412 165 Gene3D Hotdog Thioesterase 7 145 - -
Vian4g00412 165 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 24 143 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00412 Vian-Chr4 4724824 4727950 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00412 K19222 - gmx:100527403 260.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00412 4 4724824 4727950 Vian4g00412 4 4724824 4727950 ECH