Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00407 ATGTTAGCTTCTTCTCTTTCCTTCCTTCATTCCTGCGGATTCCCTTCTTCCGCTTCTTCTTCTTCCTCTTCCTTATCCACACTATCACAATCAAACCCCAAACCTTTCGTGGTTGAAGCCAAAGTTAGGACCCGAAGGGAAGACAGAACTGCGCGTCACACTCGCATCAGAAAGAAGGTTGAAGGGACACCCGAGAGGCCGAGGTTGTCGGTGTTCCGATCCAACAAGCACCTCTCTGTGCAGGTGATTGATGATTCCTCGATGCACACGCTTGCTTCGGCTTCCACAATGCAGAAGACCTTTGCTGAAGAGTTTAATTACTCAGCTGGCCCCACAGTTGAAGTAGCAAAAAGGATGGGTGAGATCATTGCAAAGTCCTGTTTGGAGAAGGGGATCACTAAGGTAGCCTTTGATCGAGGGGGATACCCATACCATGGCCGTGTTCAAGCACTTGCTGAAGCAGCTCGTGAACATGGCCTAGATTTCTAA 489 0.4908 MLASSLSFLHSCGFPSSASSSSSSLSTLSQSNPKPFVVEAKVRTRREDRTARHTRIRKKVEGTPERPRLSVFRSNKHLSVQVIDDSSMHTLASASTMQKTFAEEFNYSAGPTVEVAKRMGEIIAKSCLEKGITKVAFDRGGYPYHGRVQALAEAAREHGLDF 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00407 162 MobiDBLite consensus disorder prediction 39 54 - -
Vian4g00407 162 FunFam 50S ribosomal protein L18 43 162 - -
Vian4g00407 162 Hamap 50S ribosomal protein L18 [rplR]. 44 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Vian4g00407 162 MobiDBLite consensus disorder prediction 12 34 - -
Vian4g00407 162 Gene3D - 44 162 - -
Vian4g00407 162 PANTHER 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL 39 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Vian4g00407 162 Pfam Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 44 162 IPR005484 GO:0003735|GO:0005840|GO:0006412
Vian4g00407 162 NCBIfam 50S ribosomal protein L18 46 162 IPR004389 GO:0003735|GO:0005840|GO:0006412
Vian4g00407 162 SUPERFAMILY Translational machinery components 45 160 - -
Vian4g00407 162 CDD Ribosomal_L18_L5e 56 160 - -
Vian4g00407 162 MobiDBLite consensus disorder prediction 12 54 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00407 K02881 - gmx:100778569 265.388