Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00391 ATGACGGCGTCCAACAAGAGAAACTACAAGGATAAACCAATTCGCCGCAAAGAAGAAAAACCGGAAGAACCGGAAGTGCCAAAATACAGAGATCGAGCTAAGGAGCGAAGAGAAGATCAAAATCCTGATTATGAACAAACTGAACTTGGGTTTCATGCAGTTGCTCCACCTGGTACTGTGGATCTTCGGTCATCTGATGCGCACAAGTTATCTATTGAGAAGAGCAAGTACCTTGGAGGCGATGTGGAGCACACACATTTGGTCAAAGGTTTGGATTATGCTTTGCTGAACAAAGTAAGAAGTGAGATAGAGAAGAAACCAGATGCTGGGGATGATACTGATGGGAAATCAAGGTCAACAAAGGAAGATCAACAAGTGTCAATTCGTACAGCAACTGCTAAGTCAGTTTATCAGTGGATCGTCAAGCCTCAAACAATCAGTAAGACAAATGAAATGTTCCTCCCTGGTCGAATGACATTTATTTATAACATGGAAATGGTTACAGTTAATGTTGATGGATCCGTTCTAGATCGAATTGCTAAAATAATGTCATATCTTCGTCTTGGTTCTTCTGGGAAGATCCTAAAGAAGAAAAAGAAGGAAAAAGATGCAAAAGGGAAGATTTTGGCCGTTGGTAATGGATATGACAAAGAGGATAAGCCATCAAAGGTTGAAAGTGGAGCAAAACATCAAGCTGAAAAAGAAATAATCCCACCTCCTCCGCCTCCCATAAAGAAAAATCCTCTTCATTCAAGAGAGAAACAAGGCCCAGCTGTTGCTAGGGATGATGACATTTTTCTAGGTGATGGTATTGACTATGATGTACCTGGTAAGGACTTGAGCCAAACTCCTGTCTCCGAGGACATGGAAGAGTCTCCTAGGAACAAAGAAAAACCTTCATATTTCGAAGAACCGACTTATGGTCCTGTCCCACCTTCGATGCTTCCCCAAGGGTGGCAAGAAACTAATGGATACGATGTAATGCAAACACAAGCCTTGGCTGGCGGTTACCAAGGAGAGTGGCAAGAGTACCAGTATGCTGAACAATTGGCTTACCCAGATCAATATCTTCAACCAAATATGCAGACCTATGATGTGCAAGGAGGTGTAAATCTTCCACAAGATCCACGCTTTATGACACAAGAAGAGAAGGACCGAGGTTTGGGATCAGTGTTTAAGCGAGATGACCAGAGACTTCAACAGCTGAGGGAGAAAGATGCCCGTGAAAAAGATCCCAACTTCATTTCAGAGAGTTACTCTGAATGTTACCCAGGATATCAAGAATATAACCGTGAGATAGTGGACAGTGATGATGAAGACGACTTGTCCAAAATGGATATGGGTGGTAGGGCAAAGGGTCGCCTTCATAGATGGGACTTTGAAACTGAAGAGGAATGGGCAACTTACAATGAGCAGAAGGAAGCAATGCCAAAAGCTGCATTCCAGTTCGGTGTGAAGATGCAAGATGGCCGGAAGACCCGAAAGCAAAACAAGGACCAGAAGCTCAATAATGATCTGCACAAGATCAATAAGATACTTGCCAGAAAGAAGATGGAAAAGGACACAAATGGAGAGGGGGGCCACCATTATGATGATGAACCGACACCTGGAAAGAAGCTTCGAATATGA 1629 0.4309 MTASNKRNYKDKPIRRKEEKPEEPEVPKYRDRAKERREDQNPDYEQTELGFHAVAPPGTVDLRSSDAHKLSIEKSKYLGGDVEHTHLVKGLDYALLNKVRSEIEKKPDAGDDTDGKSRSTKEDQQVSIRTATAKSVYQWIVKPQTISKTNEMFLPGRMTFIYNMEMVTVNVDGSVLDRIAKIMSYLRLGSSGKILKKKKKEKDAKGKILAVGNGYDKEDKPSKVESGAKHQAEKEIIPPPPPPIKKNPLHSREKQGPAVARDDDIFLGDGIDYDVPGKDLSQTPVSEDMEESPRNKEKPSYFEEPTYGPVPPSMLPQGWQETNGYDVMQTQALAGGYQGEWQEYQYAEQLAYPDQYLQPNMQTYDVQGGVNLPQDPRFMTQEEKDRGLGSVFKRDDQRLQQLREKDAREKDPNFISESYSECYPGYQEYNREIVDSDDEDDLSKMDMGGRAKGRLHRWDFETEEEWATYNEQKEAMPKAAFQFGVKMQDGRKTRKQNKDQKLNNDLHKINKILARKKMEKDTNGEGGHHYDDEPTPGKKLRI 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00391 542 MobiDBLite consensus disorder prediction 488 507 - -
Vian4g00391 542 MobiDBLite consensus disorder prediction 104 127 - -
Vian4g00391 542 MobiDBLite consensus disorder prediction 516 542 - -
Vian4g00391 542 MobiDBLite consensus disorder prediction 212 232 - -
Vian4g00391 542 MobiDBLite consensus disorder prediction 247 268 - -
Vian4g00391 542 Pfam RED-like protein N-terminal region 7 165 IPR012916 -
Vian4g00391 542 Pfam RED-like protein N-terminal region 165 199 IPR012916 -
Vian4g00391 542 PANTHER RED PROTEIN IK FACTOR CYTOKINE IK 164 531 IPR039896 -
Vian4g00391 542 MobiDBLite consensus disorder prediction 1 62 - -
Vian4g00391 542 MobiDBLite consensus disorder prediction 8 45 - -
Vian4g00391 542 Pfam RED-like protein C-terminal region 419 525 IPR012492 -
Vian4g00391 542 MobiDBLite consensus disorder prediction 104 123 - -
Vian4g00391 542 MobiDBLite consensus disorder prediction 212 320 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00391 K13109 - gmx:100775354 974.156
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00391 4 4453291 4458112 Vian4g00391 4 4453291 4458112 ECH