Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00359 ATGGGTTCCTTAGTAAGAGTCTGTTCAAGCTTCATTCTAGCAGTTTTAGTGTCTATCGCAGTTCAAATCCTTTTCTTCTCACCCATTGATCCAGTTTTGCTTGATCTAAAACCTTCCACAACAACCAGAGACAACAAATTACAGAACATCATTAAACTTGGAGATGGGCATGTGAAGGAACCAGAAGATCTTTGTGTGGATAAAGAAGGGACTATGTATACTGCTACTCGAGATGGTTGGATCAAAAGAATGCTCAGAAATGGAAATTGGGAGAATTGGAAGCATATCGGTGGTGATACCTTGATAGGAGTCACAGAATCTAAAGAAGGTGGTATCATTGTTTGTGACTCTGCCAGGGGTTTGCTGAGGGTTAGAGAAGATGGTATTAGTGTTCTCACTTCACAAGCTAATGATGGTTCTAAAATAAGGTTTGCAGATGATGCAATAGAAGACTGGGATGGGAATGTGTATTTCAGCATTGTGAGTACGAAATTTGATATGCATCATTGGCATCTAGATTTCTTAGAGGCAAGACCTCATGGACAACTTTTCAAGTACACTGCAAAATCCAATGAATCTGTTCTTCTTCTCGATAACCTTGCCTTTGCTAATGGAGTTGCACTCTCCAAGGACCAAGATTTTCTTTTGATCTGTGAAACTTGGAGATATAGGTGTCTGAGGTATTGGTTAAAAGGAGAAAAGAAAGGCAAGACAGATATTTTCGTAGAAAACCTTCCTGGTGCACCTGATAATATCAATCTTGCTCCTGATGGAACCTTCTGGATCGGTTTGATTCAGTTGAGTTCTGAAAGGCTGGAGTTTATGTACAACTACAAGATAACGAAGCACCTGCTAGCTGCATCTCCAAGACTGTTTAACTTTGTGGCTGATCTGAAGAGAAGAGCAAGGGTGGTGAATGTGGGAACTGATGGGAAGATAATTAGGAAGTTTGAAGATGGTGATGGGAAGGTGATTAATTTTGTGACTTCAGCTTTGGAGTTTGAGGAGCATCTTTACTTAGGTAGTCTTAGTTCAAACTTTGTTGGAAAATTACCACTGCATGGTGCATAG 1071 0.4015 MGSLVRVCSSFILAVLVSIAVQILFFSPIDPVLLDLKPSTTTRDNKLQNIIKLGDGHVKEPEDLCVDKEGTMYTATRDGWIKRMLRNGNWENWKHIGGDTLIGVTESKEGGIIVCDSARGLLRVREDGISVLTSQANDGSKIRFADDAIEDWDGNVYFSIVSTKFDMHHWHLDFLEARPHGQLFKYTAKSNESVLLLDNLAFANGVALSKDQDFLLICETWRYRCLRYWLKGEKKGKTDIFVENLPGAPDNINLAPDGTFWIGLIQLSSERLEFMYNYKITKHLLAASPRLFNFVADLKRRARVVNVGTDGKIIRKFEDGDGKVINFVTSALEFEEHLYLGSLSSNFVGKLPLHGA 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00359 356 PANTHER STRICTOSIDINE SYNTHASE-RELATED 19 343 - -
Vian4g00359 356 SUPERFAMILY Calcium-dependent phosphotriesterase 23 353 - -
Vian4g00359 356 Gene3D - 44 354 IPR011042 -
Vian4g00359 356 Pfam Strictosidine synthase 149 233 IPR018119 GO:0009058|GO:0016844
Vian4g00359 356 FunFam ABC transporter permease protein 46 356 - -
Vian4g00359 356 Pfam Strictosidine synthase-like, N-terminal 45 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00359 Vian-Chr4 4031725 4035546 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00359 - - gmx:100798788 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00359 4 4031725 4035546 Vian4g00359 4 4031725 4035546 ECH