Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00357 ATGGGTTCTGAAAGCAAGAGCTTCGACTTTTTCAAGGAGATCGGGTTGGCTTCCTCCAATATTGGCTCTTATGTTAATGGCCAATGGAAAGCCTCTGGTTCCTCTGTCACGTCTGTTAACCCTTCTAACAATCAGACCATAGCTGAAGTGACTGAAGCTACTTTGCAAGATTATGAGGAGGGTTTGCAAGCTTGCAGTGAAGCAGCAAAGACATGGATGACGATTCCGGCACCAAAGAGGGGTGAGATTGTGAGACAGATTGGTGAAGCTTTGAGGGCCAAATTGGATCCTCTGGGTAGGCTGGTGTCTCTTGAGATGGGAAAGATTCTTGCAGAAGGAATTGGGGAAGTTCAGGAAATTATTGATATGTGTGATTACGCTGTTGGGCTAAGCCGACAATTGAATGGATCAATAATACCATCTGAACGTCCAGATCACATGATGTTTGAGGTATGGAACCCCCTAGGAATAGTTGGTGTAATCACCGCTTTCAACTTTCCATGCGCGGTTCTAGGATGGAATGCTTGCATTGCGTTGGTCTGTGGCAACTGTGTTGTGTGGAAGGGTGCTCCAACGACTCCTTTGATAACTATTGCTGTGACAAAGCTTGTAGCTGAAGTTCTTGAGAAGAACAACTTACCCGGTGCAATTTTCACATCTTTCTGTGGAGGTGCTGACATTGGTCAGGCAATAGCAAAAGACACACGCATTCCCCTGGTTTCATTTACTGGAAGTACAAAGGTTGGCTTGATGGTCCAGCAAACAGTGAATGAGAGATTTGGCAAGTGCTTGCTTGAATTAAGTGGAAACAATGCAATAATAGTCATGGATGATGCAGACATTAAATTGGCTGTTCGTTCTATTTTGTTTGCTGCTGTGGGTACTGCTGGTCAGCGGTGTACAACCTGCCGGAGACTGTTTTTGCACGAGAGTATTTACACAAATGTACTAGAACAACTTGTTGGACTCTACAAACAAGTCAAGATAGGGAACCCCTTGGAGAAGGGGACTCTAGTTGGGCCATTGCATACTCGTACTTCCGTGGAAAACTTTCAGAAGGGTATTTCAGGAGGGAAGATCTTAACAGGTGGATCTGTATTAGAGTCAGAAGGAAATTTTGTACAACCAACAATTGTTGAGATTTCTCCAGATGCTCCTGTAGTTAAAGAAGAATTGTTTGCTCCAGTTCTTTATGTCATGAAATTTCAGACTCTGGAAGAAGCAATTGCCTTGAACAATTCTGTACCTCAAGGATTAAGTAGTTCAATCTTTACACAAAGACCTGGAACTATATTCAAATGGATCGGGCCACGAGGTAGTGATTGTGGTATAGTGAATGCAAATATACCTACAAATGGAGCTGAGATTGGTGGTGCCTTTGGTGGGGAAAAGGCAACTGGTGGTGGTCGTGAAGCAGGAAGTGACTCATGGAAGCAATACATGCGTCGTTCTACATGTACCATCAACTATGGAAGTGAACTGCCGTTGGCTCAGGGAATTAACTTTGGCTAG 1512 0.4398 MGSESKSFDFFKEIGLASSNIGSYVNGQWKASGSSVTSVNPSNNQTIAEVTEATLQDYEEGLQACSEAAKTWMTIPAPKRGEIVRQIGEALRAKLDPLGRLVSLEMGKILAEGIGEVQEIIDMCDYAVGLSRQLNGSIIPSERPDHMMFEVWNPLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAVTKLVAEVLEKNNLPGAIFTSFCGGADIGQAIAKDTRIPLVSFTGSTKVGLMVQQTVNERFGKCLLELSGNNAIIVMDDADIKLAVRSILFAAVGTAGQRCTTCRRLFLHESIYTNVLEQLVGLYKQVKIGNPLEKGTLVGPLHTRTSVENFQKGISGGKILTGGSVLESEGNFVQPTIVEISPDAPVVKEELFAPVLYVMKFQTLEEAIALNNSVPQGLSSSIFTQRPGTIFKWIGPRGSDCGIVNANIPTNGAEIGGAFGGEKATGGGREAGSDSWKQYMRRSTCTINYGSELPLAQGINFG 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00357 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 269 455 IPR016163 GO:0016620
Vian4g00357 503 PANTHER ALPHA-AMINOADIPIC SEMIALDEHYDE DEHYDROGENASE 4 503 IPR044638 GO:0004029
Vian4g00357 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 36 480 IPR016162 GO:0016491
Vian4g00357 503 Pfam Aldehyde dehydrogenase family 33 483 IPR015590 GO:0016491
Vian4g00357 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 265 272 IPR029510 GO:0016491
Vian4g00357 503 CDD ALDH_F7_AASADH 24 491 - -
Vian4g00357 503 FunFam Alpha-aminoadipic semialdehyde dehydrogenase 269 455 - -
Vian4g00357 503 SUPERFAMILY ALDH-like 19 492 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00357 Vian-Chr4 4005174 4011138 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00357 1 503 Acyl Lipid Metabolism Gene Families AT1G54100 80.315 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00357 K14085 - gmx:100811186 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00357 4 4005174 4011138 Vian4g00357 4 4005174 4011138 ECH