Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00351 ATGGCCAGCACTGCCAATAGAAAAATCGAAACATACGAAGAGTTCGCGAAAGTTCACGCGCTGCTACTTGTGGCGTCGGGATTGCCGGAGTGCCTCCACCGGCGCCTGTTCGAGAAGCTCTCCGGCGAGTTATTTGACGGCGGCAACCACTTCCAGATCGAGCCATGCGAGGGCGGCCGTCAACGGCGCCTTGTTCTCACATCGGTGTCGATGGAAACGGATTCCGAAGTCTTCCTCGTTGATCACGCATGGACTTTCAGACTCTCCGACGCATACAAGCAGCTGCGTGAGGTTCCAGGATTGTCTGAGAGGATGGGTTCTCTGATGTGTGTGGATGTTGATGTGAGTTCAGATGATGGTGAAGATGAAGGGAACGGTGAGCTTGGTGTTGAGGAAACTTTGGAGAGGGAAGTTGGTGAGGCAAAGGAGAAAGGAAATGGGACGTTACGGTGGCTGGAGCTTGAAGGGCTTAACATTGATGATGCTATGCTTGTGTCTCTAGCCTTGCCAACTAGGTTTCCGGATTTAGTGGCACTTAGCCTGCTTGGAAACAAGCTCAATAGTGCCGAAGTGGTTGTTCAGGAAGTTATCAAACTTAAGCATCTCAAAGGAATATGGCTCAACAATAACCTAGGTCTTAAAAATTGTGATGGTAAGCTTGCAGGTTTGATTCTTAAGGAGTTGCCTGAACTTGAAATTTATAATTCAAGTTTCACAAGCAATTTTGGGGAGTGGGCGTTGGGCTTTTGTGCAGGGATATACGGAAAGGATAACCCTGTAAATGCTGATCACACTTCACTGCACACTGTGTCTTCTCTTGACCTTTCAAATAGGAACATTCACAATTTAAAGAATAAGGCATTTACACCCATTTGTTTGCCATCTCTTACGTACTTGAACATTCAAGGAAATCCATTGGAGCAGAACTCAGTTGGTGACTTGTTAGATCTGCTGCAGAGATTCCCTTGCCTGCGTTCATTGGAGGTTGATATTCCAGGTCCACTGGGACGAAGGGCCATTGATATTCTGGAATCTCTTCCAAACATTTCTGAGCTAAATGGTATCGATACATCCAAAATATTGGAAACAGGAAAGCATGTTATTGATTCAATGCTTCTTCCTCGTCTTCCTGAATGGACTCCTGATGAGCCACTTGCTGATCGTATTATAAATGCAATGTGGCAACATGTAATGACATATAGACTTGCAGATGAAGAAAAGTTAGACGAAACACCAGTATGGTATGTGATGGATGAGCTAGGTTCAGCTTTGCGGCATAGTGATGAGCCAAATTTCAGAGTGGCACCATTTTTGTTCATGCCAGAGGGCAATCTAGCATCAGCTGTGAGCTTTTCTATTCTATGGCCAACACAGAATGTTCGGAAAGGTGATGAGTGCACACGCGATTATCTTCTTGGTATTGGGGAAGATAAGCAACGTTCTGCCAGGCTTACTGCCTGGTTCCACACTCCAGAAAACTACTTTATCCGTGCATATGAGAAGCACCGTCAAAAATTGTTGTCCACAAGTTTAATGCCTCCCACCTTTCAGTATTCTGGGACTCAAAGTATTCATCGACATGGTGGGCGTCCATTGCTTGTTTACACAGATATACCTCACGTAGAGGAATACTTGACACATCCCGAGTTTGCAATCACAAATGAACCAAAAGAGGCAGATATAATATGGACAAGTGTGCAGGTAGATGAGGACATGAAGAAAGCTACTGGAATAACGGATCAGCAATACATTAATCAATATCCTTTTGAAGCATGTCTTGTTATGAAGCATCATTTGGCAGAGACAATTCAAAAGGCACATGGATCTCCCCAATGGTTGCAGCCTACTTATAATCTCGAAACACACCTATCTCAACTTATTGGTGACTATTGTATTCGCAAAAGGGAAGGACTAGACAATCTTTGGATCTTAAAACCCTGGAACATGGCCCGCACCATTGATACTACTGTAACTGATAATTTGCCTGCAATAATCCGGCTCATGGAAACTGGTCCCAAAATTTGCCAGAAGTATATTGAACAGCCCGCATTGTTCCAGGGGAAAAAGTTTGATCTCCGTTACATAGTACTGGTTCGGAGCATGCATCCTCTGGAGATATTCCTGTCAGATTGTTTCTGGGTTAGGATTGCCAACAACCAATATTCTTTGGCCAGAAGTAGTTTGTTTGAATATGAAACTCATTTCACTGTTATGAACTATCGCGGAACCATAAATCATAAGAATGCCAGCGAATTTGTGAGGGAATTTGAGGAAGAACATCAAGTTAAATGGTTGGATATACACACAAGAGTAAGGAAAATGATTCGTTCAGTATTTGAGGCAGCTGCTGTTGCTCATCCTGAGATGCACAGTCCAACATCAAGGGCAATGTATGGTGTAGATGTCATGTTGGACAGCTCTTTCCAACCCAAGTTACTAGAGGTAACTTACTGCCCGGATTGTACAAGAGCTTGCAAATATGACATGGATATTGTAATTGGAGAGGGAGGCGTTGCTAAAAGTTGTGATTTCTTCAATAATGTGTTCAGGTGTCTTTTTCTGAATGAAACTTCACAAGTGAGTCAATTGTAA 2592 0.436 MASTANRKIETYEEFAKVHALLLVASGLPECLHRRLFEKLSGELFDGGNHFQIEPCEGGRQRRLVLTSVSMETDSEVFLVDHAWTFRLSDAYKQLREVPGLSERMGSLMCVDVDVSSDDGEDEGNGELGVEETLEREVGEAKEKGNGTLRWLELEGLNIDDAMLVSLALPTRFPDLVALSLLGNKLNSAEVVVQEVIKLKHLKGIWLNNNLGLKNCDGKLAGLILKELPELEIYNSSFTSNFGEWALGFCAGIYGKDNPVNADHTSLHTVSSLDLSNRNIHNLKNKAFTPICLPSLTYLNIQGNPLEQNSVGDLLDLLQRFPCLRSLEVDIPGPLGRRAIDILESLPNISELNGIDTSKILETGKHVIDSMLLPRLPEWTPDEPLADRIINAMWQHVMTYRLADEEKLDETPVWYVMDELGSALRHSDEPNFRVAPFLFMPEGNLASAVSFSILWPTQNVRKGDECTRDYLLGIGEDKQRSARLTAWFHTPENYFIRAYEKHRQKLLSTSLMPPTFQYSGTQSIHRHGGRPLLVYTDIPHVEEYLTHPEFAITNEPKEADIIWTSVQVDEDMKKATGITDQQYINQYPFEACLVMKHHLAETIQKAHGSPQWLQPTYNLETHLSQLIGDYCIRKREGLDNLWILKPWNMARTIDTTVTDNLPAIIRLMETGPKICQKYIEQPALFQGKKFDLRYIVLVRSMHPLEIFLSDCFWVRIANNQYSLARSSLFEYETHFTVMNYRGTINHKNASEFVREFEEEHQVKWLDIHTRVRKMIRSVFEAAAVAHPEMHSPTSRAMYGVDVMLDSSFQPKLLEVTYCPDCTRACKYDMDIVIGEGGVAKSCDFFNNVFRCLFLNETSQVSQL 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00351 863 ProSiteProfiles TTL domain profile. 527 855 IPR004344 GO:0036211
Vian4g00351 863 Pfam Tubulin-tyrosine ligase family 581 831 IPR004344 GO:0036211
Vian4g00351 863 SUPERFAMILY Glutathione synthetase ATP-binding domain-like 640 821 - -
Vian4g00351 863 SUPERFAMILY RNI-like 148 353 - -
Vian4g00351 863 Gene3D Ribonuclease Inhibitor 137 362 IPR032675 -
Vian4g00351 863 PANTHER TUBULIN--TYROSINE LIGASE-LIKE PROTEIN 12 5 862 IPR027749 -
Vian4g00351 863 Gene3D - 657 842 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00351 K16609 - gmx:100809212 1536.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00351 4 3923461 3929306 Vian4g00351 4 3923461 3929306 ECH