Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00328 ATGCCCCACCGTCGCTCCTGGCACTCATCGCCACCCTTACTCAGCCCTCCACTCATAATCATTCTCTTCCCCATCGTCATACTCACCATCCTCTTCCTCGCTCTGCCGCCGCTCCTCTCCGCCGCCACGCGCCTCATACGCCCTGCCTCCGTCAAGACCAGCTGGGACTCCCTCAACATCCTCATCGTCGTTTTCGCAATCCTGTGCGGCGTCTTTGCCAGACGAAACGACGATGAACAGACCCCAAGAAATAACCACCACGACGCCGTTCCGGATCGAAATGCTGCGTTTCGACGAGTCCCTTCCGAAGGACAATCTCAGTGGCTTGGGTTCACAGGGGAAAGAAAGGAGTATATTAATGATACCCCTCTCAACCGGTTTCAGTCACCTGCAACCGGTGATACACCGTTGAGGATGAGAAGAAACAGCAGCTCTTATCCAGATCTGCGCCAGTGGGAAACCGGCGATGAGCGGTACAAGTTCCGCTTCTCTGATGACTTTGAAATCGACAAGCAGTTCCGCACGCCGGCTAGGGACCATTTCCCCGCCTTCGACCACCGCAAACGATTGCCGGAATCACCACCATCACTGTCACCACAACCACAACCACAACATCAGCATCAACACCATCAACAACAAGACGATGAAGAAAAGGAAATTCCGGTTGATACCTTCGAAACTCGTCCTTCATCACCGCCGGTGAAATCAATTACGCCAACTCCTCCACCACCGCCGCCGCCGCCTCCTCCTCAGCCGGAATCGGCCCGTCGCAATGCACGACGGTCGCATCGGAAAACAGAGAGAGTCAGTGAGATAACCGTCGAGCTCGACGAGCGCGAGTTCACGACGATCCGCTCTCCGCCTCCGGCTCCTCCGACACCGCCTCCGCCGTCGGCGAAGGTGCGATCGGAGCGTAAGAGCGAGCGAAAGAAGAGCAATGTGAAGAGAGAGATAGCGATGGTTTGGGCTTCAGTTCTCTCCAACCAGCGAAAGAAAAAGAAGAAGCAAAGAGCAAAAAATAACCACGATCAACATTACTACGAAGATAATGCCGACGAATTAGCGAACAGCACGACAGTGCCACCACCAACGCCGCCACCTCCACCACCTCCTCCGCCACCAACTTCAATGTTCCACAGTCTATTCCGAAAAGGACTAGGCAAGAGCAAGAAAATCCACTCAGTGTCACCGCCACCACCCCCGCCACCTCCTCCGCCGTCGAAGCGGTGGTCCAAGCGCAAGAGCCACAACCCTCCTCCGTCTCCTCCGTCTCCTGCGTCTCCTCCACGCCGTCGAAACACGGGGCGACCACCGCTGCCGAGCAGAAGCGTCAATTTCCACGACGAGATTCACGAGTCAGCTAACATCGGCAACCAGTCGCCGCTGATTCCCGTTCCGCCACCGCCTCCGCCGTTCAAGATGAAGGCGATGAAGTTCGTGGTCCGTGGAGATTTCGTCAGGATACGCAGCAACCAGAGCTCGCGGTGTAGCTCTCCAGAAAGGGAGGAGATTATAATGAATGTATCGGAAAGTACAGTGAGTGAGAGCGTTACGGATGGTAACGGCGTTTTCTGTCCCAGCCCCGATGTGAACATTAAAGCTGAATCTTTCATCGCTAAGCGCAGGGGAGAGTGGAAGCTCGAAAAACTGAACTCCTTGAAGGAGAAAAGCAATGTCTCGTTGCCTCGTAGGTTGTAG 1698 0.553 MPHRRSWHSSPPLLSPPLIIILFPIVILTILFLALPPLLSAATRLIRPASVKTSWDSLNILIVVFAILCGVFARRNDDEQTPRNNHHDAVPDRNAAFRRVPSEGQSQWLGFTGERKEYINDTPLNRFQSPATGDTPLRMRRNSSSYPDLRQWETGDERYKFRFSDDFEIDKQFRTPARDHFPAFDHRKRLPESPPSLSPQPQPQHQHQHHQQQDDEEKEIPVDTFETRPSSPPVKSITPTPPPPPPPPPPQPESARRNARRSHRKTERVSEITVELDEREFTTIRSPPPAPPTPPPPSAKVRSERKSERKKSNVKREIAMVWASVLSNQRKKKKKQRAKNNHDQHYYEDNADELANSTTVPPPTPPPPPPPPPPTSMFHSLFRKGLGKSKKIHSVSPPPPPPPPPPSKRWSKRKSHNPPPSPPSPASPPRRRNTGRPPLPSRSVNFHDEIHESANIGNQSPLIPVPPPPPPFKMKAMKFVVRGDFVRIRSNQSSRCSSPEREEIIMNVSESTVSESVTDGNGVFCPSPDVNIKAESFIAKRRGEWKLEKLNSLKEKSNVSLPRRL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00328 565 MobiDBLite consensus disorder prediction 174 449 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 301 316 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 122 149 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 264 282 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 416 435 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 285 299 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 359 377 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 208 224 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 234 254 - -
Vian4g00328 565 PRINTS Proline rich extensin signature 193 205 - -
Vian4g00328 565 PRINTS Proline rich extensin signature 232 244 - -
Vian4g00328 565 PRINTS Proline rich extensin signature 349 374 - -
Vian4g00328 565 PRINTS Proline rich extensin signature 284 301 - -
Vian4g00328 565 PRINTS Proline rich extensin signature 245 266 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 394 408 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 120 149 - -
Vian4g00328 565 PANTHER COTTON FIBER (DUF761) 287 556 - -
Vian4g00328 565 MobiDBLite consensus disorder prediction 174 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00328 Vian-Chr4 3634135 3635832 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00328 - - pvu:PHAVU_009G229500g 680.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00328 4 3634135 3635832 Vian4g00328 4 3634135 3635832 ECH