Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00310 ATGGCTACATCGGTAAAGAACAACTTCCTGAACCATGCACTGGCTTCCAAACTCCAGCAAGCACTGATCCGCAGGAAGGACAGTGTGCAGGAACAGCACCAGAGCAAAGCCAAGGAACCAACCAAAGCTTCTTCAAAACCTGTGGTACTAGTCACCAATGGTGAAGGCATAGACTCTCCTGGTCTAACATTCCTCGTGGAGGCACTCCTCCGTGATGCTCTTCTTGATGTTCATGTCTGTGCCCCACAATCGGATAGATCTCTGTGTGGTCACTCGGTTACCACTGGGGAGACACTAGCTGTGTGTTCAACACAAGTTGGTGGTGCTAATGCCTTTGAAGTGTCAGGAACCCCAGCAGACTGTGTCTCTTTGGCTTTGTCCGGGGCATTGTTTTCTTGGTCAAAACCTGTTTTGGTAATCAGTGGAGTAAACAAAGGAGCAACCTGTGGTTATGACACTTTGTACTCTGGGGCTGTTGCTGGAGCTAGAGAGGCTATGATTTGTGGTGTGCCTTCTCTTTGTATATCATTGAACTGGGAAAAGAATGTGAGTTGTGAAAGTGATTTGAAGGATGCAGTTGCTGTATGCTTACCATTAATTCAAGCAGCCATAAGTGATATTCAGAAAGGGATTTTCCCCAAGAATTGCTTCCTCAATATAGGGATCCCAAGCTGTCCTCTGACAAATAAGGGTGTGAAAGTGACAAGGCAAAGTCCAAACAGAGCTTCTTTAAATTGGCAAGCGGTGTCAACAAATAGGAACCCTTCTGCAGGCCATTACATGTCAAACCAGCAAAGTCTTGGAATCATGTTAGCAAAACTAGGACGAGATGCCTCTGCTGCCGCAGCAGCACGCCGGCTAAACTCAAACCGCAAGAACGTGGAGATTGAATCAATTGGTGTTGCTGGGAAATTCAGTTCTCAACAAAGCATAAAGAAATACTTCAGAATGGAGTTAACTGAAAAAAGGCAGGAGAATAAAGAGGATGATTTAGACTCTAGAGCACTTGAAGAGGGATATGTTACTGTCACCCCTTTGTCTGTATATGAAAATGGTGACATGGAAATTCAATCATCAGTCTCCAGTTGGTTAGCTATTGGAGTCAGTGGAGATCAATGA 1119 0.4504 MATSVKNNFLNHALASKLQQALIRRKDSVQEQHQSKAKEPTKASSKPVVLVTNGEGIDSPGLTFLVEALLRDALLDVHVCAPQSDRSLCGHSVTTGETLAVCSTQVGGANAFEVSGTPADCVSLALSGALFSWSKPVLVISGVNKGATCGYDTLYSGAVAGAREAMICGVPSLCISLNWEKNVSCESDLKDAVAVCLPLIQAAISDIQKGIFPKNCFLNIGIPSCPLTNKGVKVTRQSPNRASLNWQAVSTNRNPSAGHYMSNQQSLGIMLAKLGRDASAAAAARRLNSNRKNVEIESIGVAGKFSSQQSIKKYFRMELTEKRQENKEDDLDSRALEEGYVTVTPLSVYENGDMEIQSSVSSWLAIGVSGDQ 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00310 372 MobiDBLite consensus disorder prediction 25 40 - -
Vian4g00310 372 Gene3D - 37 363 IPR036523 GO:0016787
Vian4g00310 372 PANTHER 5'-NUCLEOTIDASE SURE 42 365 IPR030048 GO:0008252
Vian4g00310 372 Pfam Survival protein SurE 49 241 IPR002828 GO:0016787
Vian4g00310 372 MobiDBLite consensus disorder prediction 25 45 - -
Vian4g00310 372 SUPERFAMILY SurE-like 48 350 IPR036523 GO:0016787
Vian4g00310 372 Hamap 5'/3'-nucleotidase SurE [surE]. 47 369 IPR030048 GO:0008252
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00310 Vian-Chr4 3442534 3444870 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00310 K03787 - gmx:100785738 643.269