Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00301 ATGGCAAGTTGGTTCACACCCTCGTATCTGTTCATCTTCATCAACCTTGTCATTGGAACCATAGCCATCACCTCTCGTTTCACCACCACACCAAAACGCCAACGCCAACACCAACACCAACACCAACACCAACTCATCCGTTCTCCCTCTTTGCTGGACAGATTCACATCCTTCAACCTACGTTATCGCAAACATGAAACGACAGCAACGTTAACGCCTCACAACGTTGTTGTGGAGTCTGTCCAGATTCTAGACTCGCCTCGGCCGGTTCAAATCGGTTCCTTCGATACGACCGAGACCCGAGAAGGAGATGAAGTTAAAAGTGATAACTCACCCCAGTTGGACCGGGTTCCGTCTTCGTCGTTGATGAACCGGATTAGGTCTTTTAGTTTTCGTAGAACAGAAAGTGAAAGATCCGAGCCGGTCCAAAATTCTGAGTCTGGAATGAATCTGGTACGAACTCCATCTTTGTTGGAGCACGTTAGGCGTTTTAGTCTGGATTTAGGTAAAGTGCAGAAGGAAAGTTGTGACTCGGTTGAGCAGCAATTAAGCCGTGCTCCTTCCTTCCTGCAGCGGCTTAAGTCCTTGACCTTTGACAGATCGGAGTCCGAAGCTGAGGTGAGAGATGGTGGGGAGTTCGTGGAGGAAAGGGAAGAAGAGGAAGGGGTGGACGCTAAGGCTGATGATTTCATCAACAGGTTTAGGCAGCAACTCAGGTTGCAGAGGCTTGACTCTATTCTACGATGCAGGGATATGCTCACACGAAACTCATAA 774 0.4858 MASWFTPSYLFIFINLVIGTIAITSRFTTTPKRQRQHQHQHQHQLIRSPSLLDRFTSFNLRYRKHETTATLTPHNVVVESVQILDSPRPVQIGSFDTTETREGDEVKSDNSPQLDRVPSSSLMNRIRSFSFRRTESERSEPVQNSESGMNLVRTPSLLEHVRRFSLDLGKVQKESCDSVEQQLSRAPSFLQRLKSLTFDRSESEAEVRDGGEFVEEREEEEGVDAKADDFINRFRQQLRLQRLDSILRCRDMLTRNS 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00301 257 PANTHER COTTON FIBER (DUF761) 3 256 - -
Vian4g00301 257 Pfam Domain of unknown function (DUF4408) 1 27 IPR025520 -
Vian4g00301 257 MobiDBLite consensus disorder prediction 89 119 - -
Vian4g00301 257 Pfam Cotton fibre expressed protein 221 255 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00301 Vian-Chr4 3312152 3312925 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00301 - - vra:106761585 373.244