Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00290 ATGGCTGCATCGTATGCAAGACTTACTGTAGCAGCGTTGGTTCTGATAGCTTTGACACCAACCTTTCCGCAATCTTCAGTTTCAGCTTCATCTGTGGGTAAATTCGTTGACGAAACCATCAATTCCCACAAGATCGTCATTTTCTCCAAGACCTATTGCCCGTACTGCAAGAGAGCGAAAGCTTTATTCAAAGAGTTGAAACAGGTTCCACATGTTGTTGAGCTTGATGAGAGAGGTATTGTTGAACCAGGAATTGATCAGCTTACATTTTGTCTTTTTAGCATATATAATTTTACTGGAATCGAGGATGGTTCAAAGATTCAGGATGTCTTGATTAATATTGTTGGGAGGCGTACTGTGCCACAAGTTTTCGTTAATGGACAGCACCTTGGAGGCTCAGATGATACCGCTGCATCTTACGAAAGTGGACATCTGCATAAACTTCTAGGAATTAAGTCAGAGGGTCATGATGATCTGTGA 480 0.4167 MAASYARLTVAALVLIALTPTFPQSSVSASSVGKFVDETINSHKIVIFSKTYCPYCKRAKALFKELKQVPHVVELDERGIVEPGIDQLTFCLFSIYNFTGIEDGSKIQDVLINIVGRRTVPQVFVNGQHLGGSDDTAASYESGHLHKLLGIKSEGHDDL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00290 159 ProSiteProfiles Glutaredoxin domain profile. 33 156 - -
Vian4g00290 159 PANTHER GLUTAREDOXIN 2 23 150 - -
Vian4g00290 159 Gene3D Glutaredoxin 22 150 - -
Vian4g00290 159 SUPERFAMILY Thioredoxin-like 34 149 IPR036249 -
Vian4g00290 159 CDD GRX_GRXh_1_2_like 44 148 - -
Vian4g00290 159 ProSitePatterns Glutaredoxin active site. 47 62 IPR011767 -
Vian4g00290 159 Pfam Glutaredoxin 45 129 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00290 Vian-Chr4 3152972 3154825 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00290 36 149 Miscellaneous Gene Families AT4G15690 28.070 9.96e-06 40.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00290 K03676 - gmx:100777703 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00290 4 3152972 3154825 Vian4g00290 4 3152972 3154825 ECH