Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00277 ATGTGGTTTTCCTTCTGGAGATCCAGAGATCGTTTTACCTTGGATCATCTCAGGTACTTAACTGATCAACTGACAAAAGTTCAAATAGTTAACGACGTTAATAAGGATTTTGTTATCGAGGCACTGAGATCTATTGCAGAGTTGATCACATATGGCGACCAACATGACCCAAGTTTTTTTGATTTCTTCATGGAAAAGCAAGTTGTGGGAGAGTTTGTACGGATACTTAAACTCAGCAAAAGTATTAGTATTCCACTTCAGTTACTACAAACAGTGAGTATTATGATCCAGAACCTAAGAAGTGAACATGCTATATATTATATGTTTAGTAATGAACATATGAATTACCTAATTACATATTCATTTGATTTTCGGAACGAAGAGCTATTGTCATACTACATATCCTTTTTAAGAGCAATAAGTGGAAAATTGAACAAGAGTACAATTTCTCTGCTTGTGAAGACTCACGATGAGGAAGTAGTTTCATTTCCACTGTATGTTGAGGCAATTCGCTTTGCCTTTCATGAGGAGAACATGGTTCGCACTGCTGTACGTACTGTGACCCTTAATGTTTATCATGTTGGGGATGAATGTGTTAATAGATATATAACGAGTGCTCCTCACACAGAATACTTCTCAAACCTGGTTTCGTTTTTTAGGAATCAGTGTATGGATTTAAATAGACTGGTGTCTGAGGCACTCAAAAATCAAGGCTCAGATTCAACCTCTGCAATAATTGCTGCTGTAGATGAAATTGAGGATAACCTGTATTACTTTAGTGATGTTATCTCTGCTGGGATTCCTGATGTTGGGAGGTTAATAACAGACAGCATTTTGATGCTTCTGGTTTTTCCATTACTTCTTCCTTCCCTGAGAACACTGGACTCTAATGACATGCAAAGTGGTGTTGTCACTTCTCTCTACTTACTTTGTTGCATCTTAAGGATAGTCAAGATCAAAGATTTGGCAACTACCATAGTCGCTGCTCTTTTTTATCCCTTTGAGACCTTTACAAAATTTTCTGGGGGAAAAGTCAATGGCTATACATCTGATAGTGGTTTTACATCCGTAAGCCAAGAACCAGATGATAATAGTGCAAAGTGCAAAGCAGAATACTTGACAGTGGAAGTGCCAAACTCTACTAGCTCTTCAGACTTATACCCTGAAAGTGTTATGTCAGAAAATAATCGTAGCAGTTCAAATTTGACATTGAGGGAGGTTTTGCTTGCATATGTTACCAAAGGGGATGATGTACAAGTTTTGGGTTCTCTGAGTGTGCTTGCTACTTTACTGCAAACTAAAGAACTTGATGAATCTATGCTAGACAAGCTTGGAATTCTTCCACAACGCAAACAGCACAAGAAGCAGTTATTGCAAGCTTTGGTTGGTGAGGCTTCAGGTGAAGAGCAACTTTTTTCCTCTGAAAATAGCTGGATGAGGGATAGCATTGGCTGCGAGCTCAATACATATCTTGAAAAGATTAAGGAGCTCTATGGGTTATCTTCTCTCTGCTCTGATCTTGTCACAAGCCCTCGCGTGCCTAGATTTCAGGTGCTCGATGCGTTAGTTAGCCTCTTTTGTCGTTCTAATATTTCTGCAGAGACATTGTGGGATGGTGGTTGGCTTTTACGCCAGTTACTTCCTTACAGTGAAGCAGAATTCAATAGTCAACACCTGGAATTGCTGCAAGTTTCATACAAGAATTCTGCTACTGCTCTTGTAAAGGAGGTTAGAGGCTTCTGGCCCGATCTTCTTATTACTGTTCTTTGCAATGAATGGAAAAAATGCAAAAGAGCGATGGAGTCATCTTACCCTCCAAAAGAACCAAAATGTGTACTTTTTCCTTCTCCAATATTATCTTCAGAAGACGATATACCTGACAGCTCATCATTTGCTGCTGGAGAAAGACTGCATGAATTGGCAAAGGTATTTGTAGTTCTGCACCAACTTCAAATATTCACTCTAGGTAAACCTTTGCCTGAGAAACCTCTTATTTATCCTCCTGGTGATCTCCCAGCGAATTCTCGTGCTCAGACATCTGGACTTGATTTGTCAGGCCCTAAACCAGGAACTGAAGTCAACCTTGTTAATGCTGTGCCTTGTAGAATTGCTTTCGAAAGGGGCAAAGAGCGCCATTTTTCCTTTCTAGCAATCTCTGTAGGAACGTCCGGGTGGCTTGTACTAGCAGAAGAGTTGCCATTAAAGAAGCCCTTTGGCGTTGTTCGGGTTGCTGCACCTTTGGCTGGGTGCAATCCCAAGATTGATGATAAACACTCACGATGGTTACATCTGCGGATTAGACCATCTTCTTTACCTGTTCTGGATCCTGCCAAGTTCAATACCCACGGCAAATTAAAGTCAAAAGCTTTTGTGGATGGAAGATGGACGTTGGCTTTCAGGGATGAGGAGTCTTGCAAGTCTGCTTTATGCATGATTGTTGAGGAGATTAATTTTCTGTGTGACGAGGTTCACAGAAGACTAAAACCATTGCTCAACCTTGAAACCTCATTGAATTTATCAGGTCTTGCAGATGAGGATTCCTCTTCAAACACAACACCTCGAAATTCGGTGTAA 2574 0.4033 MWFSFWRSRDRFTLDHLRYLTDQLTKVQIVNDVNKDFVIEALRSIAELITYGDQHDPSFFDFFMEKQVVGEFVRILKLSKSISIPLQLLQTVSIMIQNLRSEHAIYYMFSNEHMNYLITYSFDFRNEELLSYYISFLRAISGKLNKSTISLLVKTHDEEVVSFPLYVEAIRFAFHEENMVRTAVRTVTLNVYHVGDECVNRYITSAPHTEYFSNLVSFFRNQCMDLNRLVSEALKNQGSDSTSAIIAAVDEIEDNLYYFSDVISAGIPDVGRLITDSILMLLVFPLLLPSLRTLDSNDMQSGVVTSLYLLCCILRIVKIKDLATTIVAALFYPFETFTKFSGGKVNGYTSDSGFTSVSQEPDDNSAKCKAEYLTVEVPNSTSSSDLYPESVMSENNRSSSNLTLREVLLAYVTKGDDVQVLGSLSVLATLLQTKELDESMLDKLGILPQRKQHKKQLLQALVGEASGEEQLFSSENSWMRDSIGCELNTYLEKIKELYGLSSLCSDLVTSPRVPRFQVLDALVSLFCRSNISAETLWDGGWLLRQLLPYSEAEFNSQHLELLQVSYKNSATALVKEVRGFWPDLLITVLCNEWKKCKRAMESSYPPKEPKCVLFPSPILSSEDDIPDSSSFAAGERLHELAKVFVVLHQLQIFTLGKPLPEKPLIYPPGDLPANSRAQTSGLDLSGPKPGTEVNLVNAVPCRIAFERGKERHFSFLAISVGTSGWLVLAEELPLKKPFGVVRVAAPLAGCNPKIDDKHSRWLHLRIRPSSLPVLDPAKFNTHGKLKSKAFVDGRWTLAFRDEESCKSALCMIVEEINFLCDEVHRRLKPLLNLETSLNLSGLADEDSSSNTTPRNSV 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00277 857 PANTHER UNCHARACTERIZED 1 838 IPR039272 -
Vian4g00277 857 Pfam Uncharacterised conserved protein 42 192 IPR019155 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00277 Vian-Chr4 2969612 2986673 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00277 K19513 - gmx:100789779 1488.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00277 4 2969612 2986673 Vian4g00277 4 2969612 2986673 ECH