Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00274 ATGGATTCAGAAAACTGGAGACCCTCTCTGCTCTACCTCGCCTTCCTCCTCGCAATTCTTCACCTCACGCAAAACTTCCTATCACACTTCTTCCTTGGCAACGAAACGGTGCGCATCAAGAAGAACCCCAATCTTCCCCTCCGGTTCAGTTCTGACGGTACCTTCAAGATCCTCCAGGTGGCTGATATGCACTTTGGCAGTGGAAGCCTAACCCGTTGCAGGGATGTACTGCCTTCTGAGTTCGAGTTTTGTTCGGATCTTAACACCACTCGGTTTTTAAAGCGAATCATTCAGGCAGAGAATCCGGATTTTATTACCTTTACTGGAGATAATATTTTCGGATCAAGTGCGCCTGATGCTGCAGAATCTCTGTTTAGAGCCTTTGGTCCTGTTATGGAATCAGGACTTCCTTGGGCAGCAGTTTTGGGAAACCATGACCAAGAATCAACGATGAATCGTGAAGAGTTAATGTCCTTAATTTCCCTTATGGATTATTCAGTTTCACAAATCAACCCATCAGATGATGATCCAACTAAAGGTGGCTTGATGACTAAAATTGACGGATTTGGGAATTATGACCTAAGAGTGTATGGTGCCCCAGGGTCCATGTTGGCAAACAGCACTGTTTTGAATCTTTTCTTTCTCGACAGTGGAGACAGGGCTGTTTATCAGGGAATTCGAACTTATGGATGGATCAAGGAGTCTCAACTTCACTGGCTTCGTCGTGTTTCTCAAGAATTCCAGGGACAAAATGAGGATTCTCTTCATTCTACTGATGGTATTTCCACAATTAAACCCCCCGCACTTGCATTTTTCCATATCCCTATTCCAGAAATTCCGCAACTGTTCAACAAAGAGATTGTAGGCCAATTTCAGGAGGCTGTGGCGTGTTCAAGAGTGAATTCGGGGGTCTTGCAGACCTTTGTCTCCATGGGAGATGTGAAGGCTGTGTTCATAGGCCATGACCACACCAATGACTTTTGTGGAAACTTGGATGGCATATGGTTTTGTTACGGTGGTGGCTTTGGATACCATGGCTATGGGAAAGCAGGGTGGCCCAGAAGAGCCAGGATCATACAGGCTGAACTTGAGAAGGGAAAGAATTCCTGGATGGGCGTGCAGAGAATCTTGACTTGGAAACGCCTTGATGATGAGAAGCTGAGCAAGATTGATGATCAAATCCTATGGCAGGTTAGCTGA 1200 0.4567 MDSENWRPSLLYLAFLLAILHLTQNFLSHFFLGNETVRIKKNPNLPLRFSSDGTFKILQVADMHFGSGSLTRCRDVLPSEFEFCSDLNTTRFLKRIIQAENPDFITFTGDNIFGSSAPDAAESLFRAFGPVMESGLPWAAVLGNHDQESTMNREELMSLISLMDYSVSQINPSDDDPTKGGLMTKIDGFGNYDLRVYGAPGSMLANSTVLNLFFLDSGDRAVYQGIRTYGWIKESQLHWLRRVSQEFQGQNEDSLHSTDGISTIKPPALAFFHIPIPEIPQLFNKEIVGQFQEAVACSRVNSGVLQTFVSMGDVKAVFIGHDHTNDFCGNLDGIWFCYGGGFGYHGYGKAGWPRRARIIQAELEKGKNSWMGVQRILTWKRLDDEKLSKIDDQILWQVS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00274 399 Gene3D - 53 369 IPR029052 -
Vian4g00274 399 PANTHER PHOSPHATASE DCR2-RELATED-RELATED 29 397 - -
Vian4g00274 399 PIRSF Ptase_At2g46880 3 396 IPR011230 -
Vian4g00274 399 FunFam Probable inactive purple acid phosphatase 29 54 374 - -
Vian4g00274 399 SUPERFAMILY Metallo-dependent phosphatases 54 374 IPR029052 -
Vian4g00274 399 CDD MPP_Dcr2 53 337 - -
Vian4g00274 399 Pfam Calcineurin-like phosphoesterase 55 324 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00274 Vian-Chr4 2927810 2933016 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00274 - - gmx:100818515 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00274 4 2927810 2933016 Vian4g00274 4 2927810 2933016 ECH