Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00246 ATGAGTGGCGAAAAGGAAAAAACCTCTGCACCTTCTTCTTCGCCTTATGTTGAGTTCTGCAAAGGAGTCAATGGCCTTGACAAGGTTATCCTCCGCGAATCGCGTGGCTCCTCCGCCGAGGTGTATCTGTACGGTGCACACGTGACGTCGTGGAAGAACGACCATGGCGAGGAATTACTTTTTCTCAGTAGTAAGGCTGTATTTAAGCCTCCAAAGGCAATTCGGGGAGGGATTCCAATTTGCTTTCCTCAATTTGGAGGCCTTGGCACCCTCGACCAACATGGATTTGCTAGAAATCGATTGTGGAGCATTGATGATGATCCTCCTCCATTTCCAACAAATACGTTGAGCAAAGCCTTTGTTGATTTGATACTTAAGACCTCTGAAGAAGACTCAAAAAATTGGCCTCACAGTTTTGAATACCGTCTTCGGATAGCTTTGGGACCAGGAGGAGATCTGATGTTGACATCACGGATCAGGAACACAAACAGCGAGGGAAAACCATTTTCATTCACCTTTGCATACCATACATATTTCTCTGTATCAGACATAAGTGAAGTTCGAGTGGAGGGATTAGAGACCTTGGATTATCTCGATAATTTGCAGAACAAGGAACGTTTTACTGAACAGGGGGATGCTTTAACGTTTGAATCAGAAGTGGACAAGATATATCTCAGCACTCCTACAAAGATTGCAATTATTGATCATGAGAAAAAGAGAACATTTGTTGTCCGTAAAGATGGCCTTCCTGATGCTGTGGTGTGGAATCCTTGGGATAAGAAAGCAAAGGCCATGGCTGATTTTGGTGATGATGAGTACAAGCATATGCTGTGTGTAGAGGCTGCTGCTATTGAGAAGCCTATCACTTTGAAACCTGGAGAAGAATGGAAAGGAAGGTTAGAGCTTTCAGCTGTTCCCTCTAGTTATTGCAGTGGACAACTTGATCCCCAGAGAGTTCTTCTGGGAAGCTGA 972 0.4434 MSGEKEKTSAPSSSPYVEFCKGVNGLDKVILRESRGSSAEVYLYGAHVTSWKNDHGEELLFLSSKAVFKPPKAIRGGIPICFPQFGGLGTLDQHGFARNRLWSIDDDPPPFPTNTLSKAFVDLILKTSEEDSKNWPHSFEYRLRIALGPGGDLMLTSRIRNTNSEGKPFSFTFAYHTYFSVSDISEVRVEGLETLDYLDNLQNKERFTEQGDALTFESEVDKIYLSTPTKIAIIDHEKKRTFVVRKDGLPDAVVWNPWDKKAKAMADFGDDEYKHMLCVEAAAIEKPITLKPGEEWKGRLELSAVPSSYCSGQLDPQRVLLGS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00246 323 CDD D-hex-6-P-epi_like 29 303 IPR025532 -
Vian4g00246 323 Pfam Aldose 1-epimerase 28 302 IPR008183 GO:0005975|GO:0016853
Vian4g00246 323 PIRSF PHexose_mutarotase 4 309 IPR025532 -
Vian4g00246 323 SUPERFAMILY Galactose mutarotase-like 22 302 IPR011013 GO:0003824|GO:0005975|GO:0030246
Vian4g00246 323 PANTHER APOSPORY-ASSOCIATED PROTEIN C-RELATED 18 308 - -
Vian4g00246 323 FunFam Glucose-6-phosphate 1-epimerase 24 309 - -
Vian4g00246 323 Gene3D - 24 309 IPR014718 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00246 Vian-Chr4 2581029 2585963 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00246 K01792 - gmx:100807970 624.009
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian1g00622 1 6096914 6102401 Vian4g00246 4 2581029 2585963 PCT