Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00244 ATGTTGGGTGGTGCACTTTCAACTTCAACAACTCAAAGCCTCAATGCGACAAGAACAATTGCAATGCTCTATCCAACTCACAGATTATTGTCTCTTAAGAATCCAGTGGCAAATACCAGAGGACTTTCGTCAAAAGACACTGTTTTTATCAGGGGTCATCAAATCAATATAAAGCAATTTTTTGGGCTTATCTCGGATCGTGCTCGACTAAACAAAGCAGGACTTGTTGTTTCCCCAATCTGTGGCTTGCCACTGACAGAAGATAATGTGGAGAAGGTTTTGGATGAGGTAAGGCCTGGCTTGATGGCTGATGGAGGGAATGTGGCATTACATGAGATAGATGGTCTTGTTGTTGTCCTCAAGCTACAAGGGGCATGTGGATCATGTCCTAGCTCAACCATGACATTGAAAATGGGAATAGAAACTCGCCTCAGAGACAAGATACCAGAAATCATGGAAGTGGAACAGATAATGGACACTGAGACTGGCCTCGAATTAACAGAAGAAAATGTAGAAAAAGTTCTTTCTGAAATTAGACCATACCTTGTTGGCACTGGGGGAGGGATATTAGAGCTTGTTGAGATGAAAGATTATGTTGTGAAAGTTCGGCTAAGTGGACCTGCAGCTGGGGTTTCGACAGTTCGTGTTGCCTTAACACAGAAGCTGAGAGACAAGATACCCTCTATTGCAGCTGTGCAACTAATAGACTAA 711 0.429 MLGGALSTSTTQSLNATRTIAMLYPTHRLLSLKNPVANTRGLSSKDTVFIRGHQINIKQFFGLISDRARLNKAGLVVSPICGLPLTEDNVEKVLDEVRPGLMADGGNVALHEIDGLVVVLKLQGACGSCPSSTMTLKMGIETRLRDKIPEIMEVEQIMDTETGLELTEENVEKVLSEIRPYLVGTGGGILELVEMKDYVVKVRLSGPAAGVSTVRVALTQKLRDKIPSIAAVQLID 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00244 236 Gene3D - 81 164 IPR034904 -
Vian4g00244 236 FunFam NifU-like protein 3, chloroplastic 165 235 - -
Vian4g00244 236 Pfam NifU-like domain 171 233 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vian4g00244 236 Pfam NifU-like domain 90 155 IPR001075 GO:0005506|GO:0016226|GO:0051536
Vian4g00244 236 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 165 235 IPR034904 -
Vian4g00244 236 Gene3D - 165 236 IPR034904 -
Vian4g00244 236 PANTHER IRON-SULFUR CLUSTER SCAFFOLD PROTEIN NFU-RELATED 82 234 - -
Vian4g00244 236 FunFam NifU-like protein 3, chloroplastic 82 164 - -
Vian4g00244 236 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 87 161 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00244 Vian-Chr4 2544148 2545665 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00244 - - gmx:100806364 411.379