Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00231 ATGATGCAAGTCTCTTCAATCTGTTTAGCAGCTAAGGTTCCCGTTCGCGTGAAGTCGCTGCAAACAAACCCAGCAACCATAAACGACCCTACTTCCATAGCTGCTCCTAAGTGGTCTCAAAAGACAATAACATTGCCTCCCCTTAAACGTGGGTGTCATCTAGTAACTTCTAAGCCATCGGCTCAGATTTTGAAAGAAGTTGGGCTAGAATTGTCTGGATTCAAGTGTGGCCTAGCCCATCTCTTCTTGCATCACACAAGTGCTTCTCTCACCATCAATGAAAATTATGACTATGATGTTCGAGATGACACAGAAATATTCCTCAATCAGATAGTTCCAGAGGGCCCATCTGCGCCATGGAAGCACACTTTAGAGGGAGCAGATGACATGCCGGCACACATAAAATCATCGATGTTTGGTTGTGCACTCACGATACCAATTACAAATGGAAAGCTTAATATGGGGACCTGGCAGGGTATATGGCTTTGTGAACATCGAGATTATCCTACACCGCGTACGGTTGTGGTCACTCTTAATGGAATATGA 546 0.4469 MMQVSSICLAAKVPVRVKSLQTNPATINDPTSIAAPKWSQKTITLPPLKRGCHLVTSKPSAQILKEVGLELSGFKCGLAHLFLHHTSASLTINENYDYDVRDDTEIFLNQIVPEGPSAPWKHTLEGADDMPAHIKSSMFGCALTIPITNGKLNMGTWQGIWLCEHRDYPTPRTVVVTLNGI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00231 181 Gene3D - 31 180 IPR035917 -
Vian4g00231 181 Pfam Uncharacterised protein family UPF0047 70 177 IPR001602 -
Vian4g00231 181 SUPERFAMILY YjbQ-like 37 180 IPR035917 -
Vian4g00231 181 PANTHER UNCHARACTERIZED PROTEIN YJBQ-RELATED 30 181 IPR001602 -
Vian4g00231 181 NCBIfam secondary thiamine-phosphate synthase enzyme YjbQ 69 180 IPR001602 -
Vian4g00231 181 FunFam Secondary thiamine-phosphate synthase enzyme 28 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00231 Vian-Chr4 2377870 2380560 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00231 - - gmx:100500593 327.791