Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00195 ATGACGTCAAGTACCCAAGCCTACGGTGAGCCATGGTACTGGGACAACCGCTACACCAACGAACCTGGTCCCTTCGATTGGTATCAAAAGTACATCACTTTGGCTCCCATCATCAGCCTCTATGTCCCTCCTACACAACGCATCCTCATCGTTGGTTGTGGCAACTCAGCCTTCAGCGAAGGCATGGTGGTTGATGGCGGTTACACAGATGTTGTCAACATTGATATATCTTCGGTGGTTATTGAAGCTATGAAAAGCAAATACCAAGATTTCCCCCAATTGAAATATGTGAAAATGGATGTGAGAAACATGAGTGATTTTGAATCAGAGTCTTTTGATGCTGCTATTGACAAAGGGACTCTTGACTCTATCTTGTGTGGAAATAATTCAAGACAAAATGCTACAAAAATGCTTGAGGAGATCTGGAGGGTCCTCAAGGATAAAGGAGTTTATGTTCTGGTGACATATGGAGCTCCGCTATATCGCCTACGTTTGTTACGAGAATCATGCTCATGGACAATAAAACTCCATGTCATAGAGAAACTTGCCTCAGAAGAGAAATCTGATCAACCAGTTTGGGAGCTTACAAAACCTGTTCCCCTCAATGATGATGGAACCTCTGTGGAGGAAGCTCTAGGAAGGAATCCTGATGTCCATTACATATACATTTGCACTAAGGAAATTTCTGCTAACTCAAACACAAAGCCATGA 711 0.4304 MTSSTQAYGEPWYWDNRYTNEPGPFDWYQKYITLAPIISLYVPPTQRILIVGCGNSAFSEGMVVDGGYTDVVNIDISSVVIEAMKSKYQDFPQLKYVKMDVRNMSDFESESFDAAIDKGTLDSILCGNNSRQNATKMLEEIWRVLKDKGVYVLVTYGAPLYRLRLLRESCSWTIKLHVIEKLASEEKSDQPVWELTKPVPLNDDGTSVEEALGRNPDVHYIYICTKEISANSNTKP 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00195 236 PANTHER SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 5 229 - -
Vian4g00195 236 Pfam Methyltransferase domain 51 152 IPR013216 GO:0008168
Vian4g00195 236 Gene3D Vaccinia Virus protein VP39 6 232 IPR029063 -
Vian4g00195 236 FunFam S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 6 198 - -
Vian4g00195 236 CDD AdoMet_MTases 47 156 - -
Vian4g00195 236 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 8 172 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00195 Vian-Chr4 1776268 1778577 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00195 - - vra:106762410 476.863