Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00168 ATGGCCAAAGAGAGAGAGAAGAAGCTCTACGTGGCAGTGCTCGGAAACTACGCTGCAGAACTCAAGCTTCTCCTCACAACACTGCTTCTCCTCTGCGTCGTCGCCACGCTTCTTCAGTTCCTCCCTTCCCGCTTCACCATCTCAGCCTCCGATCTCCGAGTCTGCATCTCACGTGTCACGCAAACAACACCCATACTTTCCAACACAACAAATGCTACCTCCTCATACCCACTAAAAGTATCATTATCTCAAGCCTCACCACCCCCACCGCCGCCGTCACCACCTCCACCACCACCGTCGGAGCAAGTCCTCCCCGGAGGCATCGTCAAGCGTGTGTTCAACCCTTATGGCTCTGCAGCCTACAACTTCATCACCATGGGCTCTTACCGTGGTGGCCTCAACACGTTCGCCATCATTGGCCTCGCGTCCAAGCCTCTTCACGTTTACGCTAAACCGACGTACGAGTGCGCGTGGCACTCACTCGCCGGCAAGAAACTCTCCACCACCGTTGGCTACAAGATCCTCCCCGACTGGGGCTACGGCCGCGTCTACACCGTCGTTATAGTGAACTGTACCTTCCCGGCTTCACTCAATGCTGACAACTCCGGAGGGAAGCTCGTCCTCTCCGCCTCTACCTCCGGCGGCGGCGACGCCAGCTTCAACATCACCGACACCATAGAAGCTCTCACGGAACAACCCGGCGCACTCGACACTACGTTGTTCACGTCGAAGCCGAAGTACGATTACCTGTACTGCGGTTCCTCTCTCTACGGGAACCTGAACGCGCAGCGCGTGAGGGAGTGGATCGCGTACCATGTGAAGTTCTTCGGGCCGAGGTCGCATTTTGTGATTCACGACGCCGGTGGCGTGCACGCGCAGGTGCGGGAGGTGCTCCAGCCGTGGATTGATTTGGGGTATGTGACGTTGCAGGATATAACGGACCAGGAGCGGTTTGATGGATACTACCATAACCAGTTCATGGTGGTGAATGATTGCTTACATAGGTATAAGTTCATGACTAAGTGGATGTTCTTCTTTGATGTGGATGAATACATCTATGTGCCACCCAAGAGCACCATCAAGTCCGTGCTTGATTCACTCTCCGAGTACTCTCAATTCACCATCGAACAGATGCCAATGAGTAGCAAGCTCTGCCTCACTGCCGATTACGGCAAAACCTATAGGAAATGGGGGTTTGAGAAGCTGGTGTATAAAGATTCAAAGAAAGGGATTAGGAGGGATAGAAAATATGCAGTACAACCTAGGAGTTTGTTTGCAACGGGTGTTCACATGTCACAGAACCTTGCAGGGAAGACAACTCACAAGACAGAGGGCAAAATAATGTACTACCACTACCATGGAACCATAGCTGAAAGGAGAGAATCTTGTAAAATGCTTATAAATTCAACGGAAATCACATACGAGAAAACCCCCTATGTGTTGGACACCACCATGAGAGACATTGCTGGTGTGATCAAGAAATTTGAGCTCAAGATGATTGGAAATAGGCTACAGAAGACACGGCAATGA 1530 0.5176 MAKEREKKLYVAVLGNYAAELKLLLTTLLLLCVVATLLQFLPSRFTISASDLRVCISRVTQTTPILSNTTNATSSYPLKVSLSQASPPPPPPSPPPPPPSEQVLPGGIVKRVFNPYGSAAYNFITMGSYRGGLNTFAIIGLASKPLHVYAKPTYECAWHSLAGKKLSTTVGYKILPDWGYGRVYTVVIVNCTFPASLNADNSGGKLVLSASTSGGGDASFNITDTIEALTEQPGALDTTLFTSKPKYDYLYCGSSLYGNLNAQRVREWIAYHVKFFGPRSHFVIHDAGGVHAQVREVLQPWIDLGYVTLQDITDQERFDGYYHNQFMVVNDCLHRYKFMTKWMFFFDVDEYIYVPPKSTIKSVLDSLSEYSQFTIEQMPMSSKLCLTADYGKTYRKWGFEKLVYKDSKKGIRRDRKYAVQPRSLFATGVHMSQNLAGKTTHKTEGKIMYYHYHGTIAERRESCKMLINSTEITYEKTPYVLDTTMRDIAGVIKKFELKMIGNRLQKTRQ 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00168 509 MobiDBLite consensus disorder prediction 80 101 - -
Vian4g00168 509 PANTHER UNCHARACTERIZED 29 467 - -
Vian4g00168 509 SUPERFAMILY Formin homology 2 domain (FH2 domain) 87 98 - -
Vian4g00168 509 MobiDBLite consensus disorder prediction 83 101 - -
Vian4g00168 509 Pfam Glycosyltransferase family 92 248 475 IPR008166 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00168 Vian-Chr4 1516415 1519161 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00168 K23869 - gmx:100787815 895.575