Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00164 ATGGCAACCACATCGCCATCTGCATTGCATCATCAGTTTCTCGAAAGCCCTCACGAGAACGGCACAAACGATGTTGAAACTGAAATAGCTTATGTGGAAGAATCGCTTCCAAATCTTTCTTCATTCATGGAGAACAAAGAAGAGAACAATGAGGAAGATCAAAAGTCCACAACCAACAAGAGGTATATGCCTCTTTTACTTATTAACTACATTCTACTTTTTGTTGGCTCATTCTCTGCAAGTTTGCTGTCAAAATTTTACTTTATCCACAAAGGTGCTAACAAATGGGTCTCTACATGGATTCAGAGTGTTGGTTTTCCTATCCTACTCTTTCCCATTTTTCTCCCAGTTCTCCTTAAATACACAAAAAGAAAACCTTTCGAAGGTTTCAGCAAAAAGATGTTATTGTTTTCGGTTTTGGTCGGTATCATGTTAGGGTTTAACAACCTTTTAATCTCATGGGGTGTGGCATACCTTCCTGTTTCAACCTCAGCACTTCTTTTGTCCTCCCAGTTAGTTTTCACTCTTATTCTGTCTTCCCTGATTGTGAAACAAAAAATAACCTTCACAAACCTAAATTGTGTGATCCTCATAACAGTCAGTTCTATCATTCTAGCCTTGGATTCGAGTCACGAGAAGCCAGCAGGGCTGACAAACAAAAACTACTACATAGGGTTCAGCTGCACCATCGGTGCAGGTTTTTTGTTTGCTTTGTATTTGCCAGTGATGGAGAAGATCTATCAGAAGGTGAACTGCTACCAAATGGTGATGGAAATGCAGCTGATAATGGAGATTGCAGCAACAGTATTGGCCACTATAGGCATGGCATGTGAGGGAGGGTTTTCTGACATGAAAAAAGAGGCCGAGAGCGTTTTCGACAAAGGAACCGCAGCTTATTGGGTAACCATTTTGTCGACTGTGGTGACATGGCAATGTTGCTTTATGGGAACTGCAGGAATGGTTTTTCTGACATCTTCTCTAACTGGGGGGATTTGTTCCACGACTTTGTTGTCCATAAATGTGTTGGGAGGAGTGGTGGTTTATAAAGATACCTTTGGAGGTTTCAAGGCTGTCTCAACTGTTTTGTGCATTTGGGGCTTCTGCTCTTATGTCTTTGGCATGTACATCAAAACGAAGCAAAAGAAGATTGTAAGGAAGAACAGCAGCAGTACTGGATCTTCCACTGAGTTGATCCCTAGAAGAAACTCTGATGGAATCTAG 1221 0.4136 MATTSPSALHHQFLESPHENGTNDVETEIAYVEESLPNLSSFMENKEENNEEDQKSTTNKRYMPLLLINYILLFVGSFSASLLSKFYFIHKGANKWVSTWIQSVGFPILLFPIFLPVLLKYTKRKPFEGFSKKMLLFSVLVGIMLGFNNLLISWGVAYLPVSTSALLLSSQLVFTLILSSLIVKQKITFTNLNCVILITVSSIILALDSSHEKPAGLTNKNYYIGFSCTIGAGFLFALYLPVMEKIYQKVNCYQMVMEMQLIMEIAATVLATIGMACEGGFSDMKKEAESVFDKGTAAYWVTILSTVVTWQCCFMGTAGMVFLTSSLTGGICSTTLLSINVLGGVVVYKDTFGGFKAVSTVLCIWGFCSYVFGMYIKTKQKKIVRKNSSSTGSSTELIPRRNSDGI 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00164 406 MobiDBLite consensus disorder prediction 1 21 - -
Vian4g00164 406 MobiDBLite consensus disorder prediction 387 406 - -
Vian4g00164 406 MobiDBLite consensus disorder prediction 1 20 - -
Vian4g00164 406 Gene3D - 103 214 - -
Vian4g00164 406 SUPERFAMILY Multidrug resistance efflux transporter EmrE 117 211 - -
Vian4g00164 406 Pfam Purine nucleobase transmembrane transport 65 379 - -
Vian4g00164 406 PANTHER OS09G0467300 PROTEIN-RELATED 50 385 IPR030182 GO:0015211|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00164 Vian-Chr4 1471445 1472665 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00164 45 373 Organic Solute Cotransporters AT1G30840 62.236 1.05e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00164 - - gmx:100795076 533.872