Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00163 ATGACCCCCTCTGTCAATAACCACACAAGTGAAATTGAGTTCACTCATCGTGAAAGTGAAGAAGAGGTAGCACATTTGCATGCAGATTCAGCTCTTGCCATGGACAACAACACAACAATGCAGGTGCATGCAGATCAAAAGTGTATCACTAACAAGAGGTACATGCCCCTTTTGGTGATTAACTATGTCTGTCTCTTTGTGGGTTCTCTTGCTGCTAGTTTGCTCTCTAAGTATTATTTCATCCACAAAGGTTCAAGCATTTTGGTTTCAACCTGGGTTCAAACCGCAGGCTTTCCTCTCTTGATCATCCCAATTTCTCTCCCTTATCTCCTTAAACTCACAAACAGGGTGCCCTTCACCGATTTCACTCCAAGAATGTTACTTCTCTCAATTGCAATTGGCGTTATGTTAGGATTCAACAACCTTTTCTTCTCATGGGGAAATTCATATCTTCCCATTTCAACCTCAGCGCTTTTGCTCTCTTCCCAGCTTGTTTTCAACCTTCTCTTCTCTGTCATCATTGTCAAGCAAAAACTAACCTTTTCAAACGTTAACTGTGTCATCCTTCTTACCTTGAGCTCCATCCTCCTAGCCTTGGACTCTAGCCACGAGACACCAGAGGGGATCACACGGAAGCACTACTTCTTTGGATTCTTCTGCACCATAGCCGCAGGCCTGATGTTTGCGTTCTATCTGCCTCTGATGGAGAAGATCTACAGGAGGGTGTATTGCTATGAAATGGTGATGGAAATGCAGCTTGTGATGGAGTTGGCAGCTACAACACTGGCCACAATTGGCATGGCAGGTGGGGGTGGATTTGCTAAGATGAAGGAAGAAAGTAGAATGGTGTTTGACAAGGGATGCATGGTTTATTGGGTGACGGTGATCGGAAATGTGGTGACTTGGCAGCTGTGTTTCATGGGAACTGCAGGAATGGTGTTCTTGACATCTTCTCTGACAGGGGGCATTTGCATGACGGCATTGTTGTCCATGAATGTGTTGGGAGGAGTTCTGGTCTACAAAGATGCATTCGGCGGTTTCAAAGCTATCTCCACCATTCTCTGCATTTGGGGGTTCCTTTCTTATGTCTATGGCATCTACAAACTAAATCGAAAGGAGCAACACAAAACTCTCACCAGGAACAAGAACCACATCGTCAACATTGTGGCTAACTGA 1176 0.4481 MTPSVNNHTSEIEFTHRESEEEVAHLHADSALAMDNNTTMQVHADQKCITNKRYMPLLVINYVCLFVGSLAASLLSKYYFIHKGSSILVSTWVQTAGFPLLIIPISLPYLLKLTNRVPFTDFTPRMLLLSIAIGVMLGFNNLFFSWGNSYLPISTSALLLSSQLVFNLLFSVIIVKQKLTFSNVNCVILLTLSSILLALDSSHETPEGITRKHYFFGFFCTIAAGLMFAFYLPLMEKIYRRVYCYEMVMEMQLVMELAATTLATIGMAGGGGFAKMKEESRMVFDKGCMVYWVTVIGNVVTWQLCFMGTAGMVFLTSSLTGGICMTALLSMNVLGGVLVYKDAFGGFKAISTILCIWGFLSYVYGIYKLNRKEQHKTLTRNKNHIVNIVAN 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00163 391 Pfam Purine nucleobase transmembrane transport 57 372 - -
Vian4g00163 391 PANTHER OS09G0467300 PROTEIN-RELATED 50 377 IPR030182 GO:0015211|GO:0016020
Vian4g00163 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 107 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00163 Vian-Chr4 1463007 1464182 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00163 41 365 Organic Solute Cotransporters AT1G30840 62.462 2.59e-136 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00163 - - vum:124830885 724.546