Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00138 ATGGCTTCTCAAAGCTTGCACGACGGAAAGAAATCACAAGCCAGAAGAGCATTACGATCGCTAGCCATAGGCCTAGCAGTTCCCTTCAGCCTAACACTCACCATAATCATTCTCTTCGGTTCGGGACGAAGGTACAACAGCGTATCAAAGCCCTTCTGGTTCGCACCACTATGGTTCATTAACTTGGCTTCGTTAGCTTCGTCTTTGTTCATGGGTCTTGCAGCATGGTTAGTCTGGGCTGACGGTGGCTTCCAAGGAGAAACCGACGCAATGTCTCTTTATATAGCTCATCTCTCTCTCAGCATTGTCTGGCACCCTCTTGTCCTCATCATGGCTGCTTATTGGCTTGCTTTGCTTTCTTGCATCATCAACTTTTGCACCCTCTTTATGTGCTACTTGAGGTTTAGAAAGGTTAACCCTTTTGCCAAAGATCTAGCCAAACCTTGTTTGGCTTTCGCTTTGTATCTTTCTCTTGTTAGCTTCAAGCTAATGTTTATCTGA 501 0.4551 MASQSLHDGKKSQARRALRSLAIGLAVPFSLTLTIIILFGSGRRYNSVSKPFWFAPLWFINLASLASSLFMGLAAWLVWADGGFQGETDAMSLYIAHLSLSIVWHPLVLIMAAYWLALLSCIINFCTLFMCYLRFRKVNPFAKDLAKPCLAFALYLSLVSFKLMFI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00138 166 FunFam translocator protein 2 17 166 - -
Vian4g00138 166 Pfam TspO/MBR family 42 164 IPR004307 GO:0016020
Vian4g00138 166 Gene3D TspO/MBR protein 7 165 IPR038330 -
Vian4g00138 166 PIRSF PBR 10 166 IPR004307 GO:0016020
Vian4g00138 166 PANTHER PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR 17 164 IPR004307 GO:0016020
Vian4g00138 166 CDD TSPO_MBR 21 158 IPR004307 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00138 Vian-Chr4 1282710 1283210 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00138 K05770 - gmx:100790873 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00138 4 1282710 1283210 Vian4g00138 4 1282710 1283210 ECH