Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00137 ATGCTGGAGCGGTGCCTGGGGACGCGGCGCGTGCGGCAGATTCATCGCGCGTGCCGGCACAGTTCGGTGACTTTCCTCTGCCTCTTCCTCACGGTGGTCGTCCTCCGCGGCACAATCGGCGCTGGCAAGTTCGGTACGCCGGAGCAGGACTTCAACGAGATCCGCCACCACATCTCCGCCGCCCGCGCCCGCCGCGTCCTCGAGGAGACCAAACCTGACACCGGTTCCAACGCCGATTCCAACCCTAACAACTACGCCACCTTCGATCTCTCTAAGATCCTCGTGGATGAGCCTCCCACAGAGGACGAAAAGCGTGACCCAAATGCTCCCTACACTCTCGGACCCAAAATCTCTGATTGGGATGAACAGCGCCGAGCCTGGCTCCGAGCCAACCCTGAGTACCCTAACTTCATACGACCCAACAAGCCACGTGTACTTTTAGTGACCGGTTCGTCCCCCAAACCGTGTGAAAACCCGGTCGGTGATCACTACCTTGTGAAATCGATCAAGAACAAGATTGACTATTGTAGGGTTCATGGGATTGAGATTTTCTACAACATGGCTCTTTTGGACGCTGAGATGGCAGGGTTTTGGGCCAAGCTTCCCTTGATTCGTAAACTTTTACTGTCGCACCCTGAAGTGGAGTTTCTCTGGTGGATGGACAGTGATGCAATGTTCACCGACATGGCTTTTGAGGTTCCCTGGGAGAGGTACAAAGATTCCAACTTTGTTATGCACGGGTGGAATGAGATGGTGTATGATGAGAAGAATTGGATTGGGTTGAACACTGGGAGTTTTCTTTTGAGGAATTGCCAATGGTCTTTGGATATTCTTGATGCTTGGGCTCCTATGGGGCCTAAAGGGAAGATTAGGGATGAGGCTGGGAAAGTGCTCACTAGGGAGCTTAAGAATAGGCCTGTTTTTGAAGCTGATGATCAATCTGCTATGGTTTATTTGTTGGCCACTGGGAAGGAAACATGGGGTAACAAGGTTTACCTTGAGAATCATTATTACTTGCACGGGTATTGGGGGATTTTGGTGGACCGTTATGAGGAGATGATTGAGAATTATCATCCGGGACTTGGGGATCATAGGTGGCCTTTGGTGACCCACTTTGTGGGGTGCAAGCCTTGCGGGAAGTTTGGGGATTATCCTGTGGAGAGGTGCTTGAAGCAGATGGATAGGGCTTATAATTTTGGGGATAATCAGATTCTGCAGATGTATGGCTTCACTCACCAGTCCCTTGCTAGTCGCAGGGTGAAGAAAGTGAGGAATGATACTAGCAACCCTCTTGAGATCAAGGATGACCTTGGGTTGCTTCACCCTGCTTTCAAAGCTATCAAGCTCCCTTCTTCTTGA 1359 0.5114 MLERCLGTRRVRQIHRACRHSSVTFLCLFLTVVVLRGTIGAGKFGTPEQDFNEIRHHISAARARRVLEETKPDTGSNADSNPNNYATFDLSKILVDEPPTEDEKRDPNAPYTLGPKISDWDEQRRAWLRANPEYPNFIRPNKPRVLLVTGSSPKPCENPVGDHYLVKSIKNKIDYCRVHGIEIFYNMALLDAEMAGFWAKLPLIRKLLLSHPEVEFLWWMDSDAMFTDMAFEVPWERYKDSNFVMHGWNEMVYDEKNWIGLNTGSFLLRNCQWSLDILDAWAPMGPKGKIRDEAGKVLTRELKNRPVFEADDQSAMVYLLATGKETWGNKVYLENHYYLHGYWGILVDRYEEMIENYHPGLGDHRWPLVTHFVGCKPCGKFGDYPVERCLKQMDRAYNFGDNQILQMYGFTHQSLASRRVKKVRNDTSNPLEIKDDLGLLHPAFKAIKLPSS 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00137 452 PANTHER XYLOGLUCAN 6-XYLOSYLTRANSFERASE 5-RELATED-RELATED 7 436 IPR008630 GO:0016020|GO:0016757
Vian4g00137 452 Pfam galactosyl transferase GMA12/MNN10 family 142 381 IPR008630 GO:0016020|GO:0016757
Vian4g00137 452 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 141 297 IPR029044 -
Vian4g00137 452 FunFam xyloglucan 6-xylosyltransferase 2 141 292 - -
Vian4g00137 452 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00137 Vian-Chr4 1278848 1280206 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00137 1 452 Glycosyltransferase AT3G62720 76.419 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00137 K08238 - gmx:100818287 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00137 4 1278848 1280206 Vian4g00137 4 1278848 1280206 ECH