Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00135 ATGGCTCTCAGACCCATCGACAACGCTCTCCCAACAACAACACCAGAGAGACCCAAAAAGCAACCCAAGATCGCTGTTGCAACCCAAAAGCAGCAAGATCGTGCTGCTGTCGTCAATGGCGAAAACCAAGTTCCCTTGCCCTCATCAGGGGATGCCACTGTTGACTATGTCTCCTCGGACAACCTTAAACCCTTGTCCGATCCCGAAGTTCAGATTCAGAGTTTGATTGAAGATTTGAATTCGAAAAATTGGACCAAAGTTTGTGAGTCTCTGAACAATGCTAGGCGATTTGCGGTGTTCCACTCACCCCTTCTATTCCCTATTTTGGGAAGTATTGTGTTGGTGGTGACGAAGACAATGAAGAACCCTCGTAGTGCCCTTTGCAAAACCGCAATTATGGCAGCTGCTGATATTTTCAACGCCTTTGGTGACAAGTTGCTTGACCCCGAGACCTCTGATGCATTTGATGGCTTGCTGCTGCAGCTTCTACTAAAAGCTTCCCAAGATAAAAGGTTTGTGTGTGAAGAAGCTGATAGGGCACTAAGCTCAATGGTTAGTTCCATGACCCCTCTTCCTCTGCTTCAGAAACTAAGGGTATATGTGAGTCACAAAAACCTTAGGGTCAGGGCCAAGGCTGCTGTTTCTCTCTCCAACTGTGTCTCAAAGATGGGTCTTGAAGAAATGGAGCACTTTGGGTTGGCTGAACTGATTGAAGTGGCAGCTGATTTACTGAATGATAGACTTCCAGAGGCAAGAGATGCAGCCCGAAGTATTGCAACTGACGTGTATGAGGCACTGACTAAGGACGCAGAACAGAAGATGGAGTTGTGGCAGAGCTTCTGCCAATCCAAGTTGCCACCAATTCATGCACTTTCAATGTTGAAAATAGTTAAGCCCTGA 900 0.4678 MALRPIDNALPTTTPERPKKQPKIAVATQKQQDRAAVVNGENQVPLPSSGDATVDYVSSDNLKPLSDPEVQIQSLIEDLNSKNWTKVCESLNNARRFAVFHSPLLFPILGSIVLVVTKTMKNPRSALCKTAIMAAADIFNAFGDKLLDPETSDAFDGLLLQLLLKASQDKRFVCEEADRALSSMVSSMTPLPLLQKLRVYVSHKNLRVRAKAAVSLSNCVSKMGLEEMEHFGLAELIEVAADLLNDRLPEARDAARSIATDVYEALTKDAEQKMELWQSFCQSKLPPIHALSMLKIVKP 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00135 299 Pfam CLASP N terminal 105 276 IPR024395 -
Vian4g00135 299 MobiDBLite consensus disorder prediction 25 50 - -
Vian4g00135 299 SMART TOG_3 61 291 IPR034085 -
Vian4g00135 299 MobiDBLite consensus disorder prediction 1 50 - -
Vian4g00135 299 PANTHER CLASP 27 256 - -
Vian4g00135 299 SUPERFAMILY ARM repeat 71 279 IPR016024 -
Vian4g00135 299 Gene3D - 49 286 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00135 Vian-Chr4 1260236 1261692 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00135 - - gmx:100806408 519.62