Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00130 ATGGAAATGGAGGAAACTGTGGCTCGTGTAATCTCTGAGATAGAGGAATTCCGCGGAAGCCATGAACAACCACCGCTTTCAGAACAAACCCTAAGGGATCTTCAAATTCTCCTCAACAATTCTCTATCGGAGAGCCTCTACGATGAGCTTCCATCGAAGAATCTCTCTCCCTCTGCTCTCATCGCTCCAATTGCTTCCGCAATGGACTCTTCCCCTTCCCACCACTCTCTACTCGCTTCCGATGTCTTCCTCTCGCTCCTCCTCGCCCCAAACGCTCCCGTTTTCACCCTCTTCACTCCCATATCCTTCCTTTCCTTCCTCCGCTCCCTCCGCCGTTCCTGCAAAGCTCACTCCAACCCAGGCCCGGCTCAAGAGACCTCGCAAAACCGCAAGAGAAAGCGTGCTGGACGGATCCGTGCCAAAAATCCCCAAAACGACAACGACTCGACCGACTCCAGTTCGCAACACGACCCCAAGTTGCTCCTCCGCGTGCTGGAGAAGCTAGTCCGGGTAATGGACTTTATCCACCTGGACCGTTTTCCGGAAACTCTACGGTCGCTTGTCCAAACCATCGCCGAAATCCCCGTCACTGCGCTCGACGCGTGCGGGAACGCGGCGCAGTATAGCAAGTTGCTCAACCTGTGTTCTCGCGTGCTGAGGGAGGTTCTCAAACCTGAGCATGGGGAACCTTCCAACTCTGCCGCTGAGGTATTGAAGTCTCTCTGTCCGCTTGTTCTCATGGCGAAGTCACAGGCGCGGAGCTTTGCTCTTGAATTTGTAACAAGTCTTGGTGACCGGTGCGATGGGGTTAAGAAAGCGCTGGTTAATTTTCCGAGGTATTTGGTTAAGAAGGCGCCGGAGAGGGCCGAGCCTAGAGCCTTGGCTGTGGACTCCATCATTGAGGTTGTTAGGGCGGTGGAAGTTGAGGATCAGATTGCGTTTGTGAAGTACGTGGTGCAGATGACTCAGGGGAAGGCGAATCTTCGGCTTTTGGCGGTTGATCTTATACTGAATTTGATGACTTCTTTGAAGGATCCATTAGGTGTGGAGAGTGAAGGCAGTGAGGCGTGGGGATTGTGGTGCTTGGAGGCGTTGATGAAGAGGTGTTCTGATGTGAGTGGTGCGATCCGGGCGCGGGCTTTGTCCAGCTTGGCGCAGCTTGTGGGTTTGTTGTCCCGTGGTGAAAGGACTAGTGTGGTTTTTAAGGAGTTTTTGGGGTTTGGAAATGTTGGTGGTGAGAATGTTGAGGGTACAATGAATGATATGTTGAGGAGAAGGTGTATGGATGATAAGGCAGCTGTGAGGAAAGCCGCATTGCTTTTAGTTACTAACCTGACTTCTCTTCTCGGAGGTGCAATTGATGAAGTGGTTCTCAAGACAATGGGCATGGCTTGTTCGGATCCACTTATCAGCATGCGGAAAGCCGCTATTGCAGCTCTTTCACAGGCTTTCAGAACGTTCTCTTCTGAAGCAGTAATAACCGAGTGGCTACATTCAGTTCCCCGTCTGATAACGGACAATGAATCAAGCATCCAAGACGAATGTGAGAACACTTTTCAAGAACTTGTTTTGGACCGGATATCTAGAGCTGCATCTGCTTCTTCTTCATATACTGTATCTTCGCATAGAAAGATGAAAGGAAAATTTATAGACAATGAGATGGAGATGCTTTTTCCCGACGGAATTCTGTATCTCCTTAGAGAGGTTTGCAACGGGCAGGTGAGCCCTTGGGTAAAGAAAATTTGCACAAACCTGGGCAAAAAGAAACGGATGAATCAGAAAATTGTTATTGCACTGCAAAATATAATCAGGCAATCGGAATCTATCTGGCTGAGTCATTCCATGCCTATTGAAAAGTGGACTGCTCCGCCAGGTGCTTGGTTTCTTTTGTCAGAGGTGTCAACATTCCTTTCAAAAGCAGTAGACTGGGGTTTTCTTCATCATCATTGGCAGCTTCTTGATAAACATGAAGTGGAAGGTGAGTTCAAAAGCCCAATTGCACGAAAAGAATCATCTGAAGAAGAAAGCACAGAATGCAATACTGTTGCCTGGGCTAGTGACCGAGTTTTCCTCTTACAAACAATTTCTAATGTTTCTGTGGAGCTGCCCCCTGAACCCGCAGCTGATTTAGCTCATAACTTGCTCAAACGAGTTCAAGCATTCAACATGCACTCAACGGAGGTTGACGCTCATTTAAAAGCACTAAAAACATTATGCAAGCGGAAAGCTTCAAATCTCGAAGAGGCAGAATCATTAATCTTGAAATGGATCGACCAAGTTCTCGCCAGGGCTTCTGCAATAATAGAAAAATTCATTTCAGATAATTCAGAAAAAAATGCGGAAGGAAGCTTCTTCACTCCTCCCAGAAGTGGGACTAGGAAAGGCAGGAAATCAGTAGCAATTTCCAAGGCATTGTCTAAAGCAGTTACAGCGATTTATACAGTTGGGTCTCTGGCTATTGTTTGCCCATCTGCTGATATGGGCAATGTAGTTCCCCTAATGCATACCATCATTACTTCTGGGAGTTCTGGTCATAAATTAAATAACCTACCTGGCCCTTCAACTTCGTTACAACATGAAGCTCCTTCTTTTTATATTCAAGGGTGGCTTTCCATGGGCAAGCTTTGCCTTGCTGATGGGAAGCTAGCCAAGAATTATATTCCTCTGTTTGTACAGGAGCTTGAAAAGAGCGAATCTGCAGCACTTCGCAACAACATTGTGGTCATGATGGCAGATTTTTGTGTCCGGTACACCGCACTTGTTGATTGGGACTATGTGAAATGGAGAGGAGTGCTATTTCTTCGGTTCCTTTTGTCACTTGTTGACGAATCAGAAAAGATAAGACGGCTAGCGGATTTTCTTTTTGGAAATATTTTGAAAGTCAAGTCTCCACTTTTAGCATACAATAGTTTTGTCGAGGCTGTCTTTGTACTGAACGATTGTCATGCCCATAATGGACACCGTGAGTCCCATGGGTCACGAAAGGAAAGTCAAAGTTTTTCCATCAGGGGTACTGATGAAGAGCCAAGGTCCAAAAGGATGCACATTTATGTCTCTTTACTGAAACAAATGGCTCCGGAGCATCTTCTAGCAACCTTTGCCAAGTTATGTGCAGAAATTCTAGCTGCAGCTTCTGATGGTATGCTCAATATAGAAGATGCAACTGCACAGTCTGTTCTAGAGGATGCTTTTGGAATTCTTGGCTGTAAAGAGATACGCATTCCATCTACTCGAGCATCATCAGAGTCAGCAGACATAGAGGAAGAAGGAGACAATGGATCTGCAGCTAGAGGAAAGGCCGTAACTCAGGCAGTCAAGAAGAGCCTTATCCAAAATACAGTCCCCATCTTCATAGAATTAAAACGTCTGTTGGAAACCAAGAATAGTCCCCTGATAGGTTCTCTCATGGAGTGCCTCCGGATTATTCTAAAGGACTACAAGAATGAGATTGACGACATATTGGTTGCTGATAAACAGCTGCAGAAAGAGCTTATTTATGATATTAAAAAATATGAAGCTGCAAAAGCTAAAGCAACAGTTGCTGAAGCCGTGGTTGGAACCAAGCCAAAATCAGGTTCAAATCAATCACCTGATGGTTCTAAGAGCCTGACCAAGACACAAGGACAAGCAGTTGGACAAAGTATGGCAAGTGAAAAGCTTCCAAGTGATTCAAAAGTCGCTTCAGCAATGGCAGATGCTGCAGCTGCAGCAACAGCTCGTTCTGTGCTCAGGGAAATAAACAAGGGAACGGGTACACCACCTCTTCGTTCTTGTAGTGTTCCTAAAGTCAAGTCTCGTACTGGTATGTTTAATTCCAAAGATGTGAATCGCAGGGATGCCATACAATCTGTAAGGAAAAAACAGTCTTTCGATTCTGATGAAGAAAACTAA 3891 0.46 MEMEETVARVISEIEEFRGSHEQPPLSEQTLRDLQILLNNSLSESLYDELPSKNLSPSALIAPIASAMDSSPSHHSLLASDVFLSLLLAPNAPVFTLFTPISFLSFLRSLRRSCKAHSNPGPAQETSQNRKRKRAGRIRAKNPQNDNDSTDSSSQHDPKLLLRVLEKLVRVMDFIHLDRFPETLRSLVQTIAEIPVTALDACGNAAQYSKLLNLCSRVLREVLKPEHGEPSNSAAEVLKSLCPLVLMAKSQARSFALEFVTSLGDRCDGVKKALVNFPRYLVKKAPERAEPRALAVDSIIEVVRAVEVEDQIAFVKYVVQMTQGKANLRLLAVDLILNLMTSLKDPLGVESEGSEAWGLWCLEALMKRCSDVSGAIRARALSSLAQLVGLLSRGERTSVVFKEFLGFGNVGGENVEGTMNDMLRRRCMDDKAAVRKAALLLVTNLTSLLGGAIDEVVLKTMGMACSDPLISMRKAAIAALSQAFRTFSSEAVITEWLHSVPRLITDNESSIQDECENTFQELVLDRISRAASASSSYTVSSHRKMKGKFIDNEMEMLFPDGILYLLREVCNGQVSPWVKKICTNLGKKKRMNQKIVIALQNIIRQSESIWLSHSMPIEKWTAPPGAWFLLSEVSTFLSKAVDWGFLHHHWQLLDKHEVEGEFKSPIARKESSEEESTECNTVAWASDRVFLLQTISNVSVELPPEPAADLAHNLLKRVQAFNMHSTEVDAHLKALKTLCKRKASNLEEAESLILKWIDQVLARASAIIEKFISDNSEKNAEGSFFTPPRSGTRKGRKSVAISKALSKAVTAIYTVGSLAIVCPSADMGNVVPLMHTIITSGSSGHKLNNLPGPSTSLQHEAPSFYIQGWLSMGKLCLADGKLAKNYIPLFVQELEKSESAALRNNIVVMMADFCVRYTALVDWDYVKWRGVLFLRFLLSLVDESEKIRRLADFLFGNILKVKSPLLAYNSFVEAVFVLNDCHAHNGHRESHGSRKESQSFSIRGTDEEPRSKRMHIYVSLLKQMAPEHLLATFAKLCAEILAAASDGMLNIEDATAQSVLEDAFGILGCKEIRIPSTRASSESADIEEEGDNGSAARGKAVTQAVKKSLIQNTVPIFIELKRLLETKNSPLIGSLMECLRIILKDYKNEIDDILVADKQLQKELIYDIKKYEAAKAKATVAEAVVGTKPKSGSNQSPDGSKSLTKTQGQAVGQSMASEKLPSDSKVASAMADAAAAATARSVLREINKGTGTPPLRSCSVPKVKSRTGMFNSKDVNRRDAIQSVRKKQSFDSDEEN 1296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00130 1296 MobiDBLite consensus disorder prediction 986 1007 - -
Vian4g00130 1296 MobiDBLite consensus disorder prediction 142 156 - -
Vian4g00130 1296 SUPERFAMILY ARM repeat 318 1147 IPR016024 -
Vian4g00130 1296 Pfam non-SMC mitotic condensation complex subunit 1 918 1049 IPR032682 -
Vian4g00130 1296 PANTHER CONDENSIN 10 922 IPR026971 GO:0007076
Vian4g00130 1296 Coils Coil 1143 1163 - -
Vian4g00130 1296 Coils Coil 732 752 - -
Vian4g00130 1296 Gene3D - 361 532 IPR011989 -
Vian4g00130 1296 MobiDBLite consensus disorder prediction 1278 1296 - -
Vian4g00130 1296 MobiDBLite consensus disorder prediction 1187 1224 - -
Vian4g00130 1296 MobiDBLite consensus disorder prediction 1188 1221 - -
Vian4g00130 1296 MobiDBLite consensus disorder prediction 1245 1296 - -
Vian4g00130 1296 MobiDBLite consensus disorder prediction 1078 1097 - -
Vian4g00130 1296 MobiDBLite consensus disorder prediction 115 156 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00130 K11491 - gmx:100781242 2008.03