Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00119 ATGAGTGAAGAAGTAAAAAAGAACTTCGCCGGACCTCCAACGGCGAGGCTCAACGCCGATGACCGGAAACCGTTACCGGCACCGGCCGTTCCCCCGAAGAAGGTCATCATCAAGAGCGCCGACATGATCCCCGACATGCAGAAGGAGGCCGTTGATATCGCCGTCGCCGTTAGTTTTTACGACTTTCCTCTCTTCCTTTTCTTTGCCTTTGAGAAGTACAATGTGGAGAAAGATGTTGCGGAGCAGATAAAGAAGGAGTTCGATAAGAGGCATGGCCCCACTTGGCATTGCATCGTTGGTCGTAATTTTGGCTCATATGTGACTCATGAAACAAACCACTTTGTTTATTTCTATTTGGATCAGAAAGCGGTTTTACTCTTCAAATCTGGCTAG 393 0.4809 MSEEVKKNFAGPPTARLNADDRKPLPAPAVPPKKVIIKSADMIPDMQKEAVDIAVAVSFYDFPLFLFFAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00119 130 SMART Dynein_light_2 30 129 IPR001372 GO:0007017|GO:0030286
Vian4g00119 130 PANTHER DYNEIN LIGHT CHAIN 33 130 IPR001372 GO:0007017|GO:0030286
Vian4g00119 130 FunFam Dynein light chain 30 130 - -
Vian4g00119 130 Pfam Dynein light chain type 1 34 129 IPR001372 GO:0007017|GO:0030286
Vian4g00119 130 SUPERFAMILY DLC 31 130 IPR037177 GO:0007017|GO:0030286
Vian4g00119 130 ProSitePatterns Dynein light chain type 1 signature. 96 110 IPR019763 GO:0005875|GO:0007017
Vian4g00119 130 MobiDBLite consensus disorder prediction 1 30 - -
Vian4g00119 130 CDD DLC-like_DYNLL1_DYNLL2 34 129 - -
Vian4g00119 130 Gene3D Protein Inhibitor Of Neuronal Nitric Oxide Synthase; 32 130 IPR037177 GO:0007017|GO:0030286
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian4g00119 Vian-Chr4 1101455 1105346 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00119 K10418 - gmx:100305908 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00119 4 1101455 1105346 Vian4g00119 4 1101455 1105346 ECH