Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00116 ATGGAGATACTAGCACGCACACTCATTGCCATTTCACTCTGCGCTCTCTCTTTCTTCTCAGTTTATTGTTCTCAATATCTTACTTCAGATAGATCACAACTTCCCCTGTTCGCTTTTAGTTGGTGGGATGACAAGGGCACATTCCAGGCCGGTGACACAGCAACCATCAAAGTAAAAGTGCTTGAGAATGCTGATAAGATTGACAAAAAAGTTTTCAATCCCACACTAACTGTGAATGGAAAGGAAGGGAACAGTTCCTATGTGTCTACTGTGTTGTCAGATTTCGAAGGAGACCCAAATGAATGGAAGATCTTCTTCACCCCCATCAGGGTTGGATTGTTTAATGTACTCATCAGTGAGGAGCGTTATAAAGTTGATGATTCATCTTTGCATTTCCAAGTTGAACCAGGGAACATGTACCCGTCTGTGTGCGTTGCATCATGGAAAGGAGTGAGACATGAGTACGAAGCTGGTTCAAAAGCTACGCTTATGGTGCTACTTAAAGATGCATTTGGGAACGGTATCTCTAAGACGACTCAAGTGTCCTATTTGCCTGATTTCAAGTTGTCTGTTTTGCATGAAAATGGCGCTGTTGCAAGTGCTCCAGATATCTTTAACATGGGGTGGACTGAGTTTGATTATATAGTCATTGAGTTTATTGTGACGAAAGCTGGAAAGTTCTCATTGAGCTTAGAAGGAGGAAATCAAACCTTGAAGGGTTCTCCATTACCATTGAAGGTGAATCCAGGAGCTATAGATGTCTCTAACTGTATCGCCAAATGGAACGTTGCATCTCATGCATGGCAATTGTCTTCCAAGATGGAAATCTTTATACATCAGTTAGATAAATACGGAAATCTGGTTTCTGGACTGTATCCTTTTGATTCTGAAGTTGTTGAAACTGACACAAACTTGTCGATACCAATATCAGATCTCCATTTTCAAGAAGTGGATGCTGGAATTCAGTTGTTTTCGTTTAGCAATTTTGAGCCAGGGAACTTCCTATTGACAATATATGATTCCAAGCATAATAAAAGCATTTCCAACATGCCATATGTTTATACTGTTTTTATAGGTTACTGTGATGGGGTTAAAAGTGTTGTTAATGGATCAGGTTTAAATGATTCAGTAGCTGGTGTAAAGGAAGAATTATCTGTGTATTTGAATGACATCTATCAATATCCTTCCCCTGTCCAAGCAAACATACTTCAAGTACAAATTTCAATAGAAAATGACTCGTACAGAGTTATTCCAGTCATATATCCTGTGCTTGACAATAATGGGAGCAGAATAGCTTCAGGATTGAGATATGATGGTATCGGTCACATGGAAACTGTGCCATCATCTTCAATAGTGTTGAGAAACAATTCTAATGGGAGTGGGAGCTTTATCATGGCAAGTGATTTTCGAGTCGATTACATACCAGAAAAAAGTGGATTTTATGATATTAATGTATATTGTGGAAACATATTATTGAATGAGGGACATTCTTTCCGAAAAGAGGTAAAAGCAGGTGAAGTAAATGTTTCCTTGTCAAGTGTCACGAGCTTTTCTCCAAAGGTGCCAAAGCTGTCCAAAAATGAAATAATTGTCCAGCTTGTGGATTCATATTTAAACCCCGTCCTCTCACAACAATCTAGGTTGAAATTGGAGATTGCTTCTGTTAATAGTTCTGGCTTTTCGACTTTGGACATTACAGACAATAAGGATGGATCATACAGCTGCAGTTACATGGCCAAAGATGTTGGAACTTACGAGATTTGTGCTTCCTTTGATGGCAAAAGTTTCTTATCATGTCCCTTCAGTATCAATGTGTACAGCAGTGAGTATTTTCCAAAAGCCAACAATGATACAATATCTATTTGGGAGGACCAATCCGTTGCCTTTGATGTCTTAACAAATGATTATTTTGCTGGTGATAATGCAAGTATAGTTGAATTCTCAAAATCAGATCACGGTTCACTTATACAGAATGGAAGGATCTTTCGTTACACTCCTTATAAAGGGTATTATGGAAATGATTCCTTTTGGTATACAATTTCTGATATAAATGGAAATCTTGCTTCTGCTTCCGTGTGCATATTTGTTCTCAATGTTCCACCTCAGTTTGTTTCTGCTCCAAATCAACTGCAAGCAACAGAAGATTCAATAAGTCCTAGATTTGGTGGTTTCACCGGGTTTGAGATAACTTATTCAAATCCTATGGAAAATATTTCTGTCAATCTTAGTGCTCAATCTGGAATTGTACTTCTGTCTCCTATGGCTATGCAATTTGGGCAAGTAATGTGGAGTGAACTTACATTTGACACAGGAAATGAAACTGCAACCAGTTTAATAATAGAAGGCTCTGTGGAAGTTATTAATTTTGCACTTCAGTCAATTCAGTATCTGGGAAATGAAAATTTTTATGGAGGAGATACCATTCAAGTCTCAACCAGGAATAAGAACGGAGTAAATTCACTTGGTGTTCCAATTTTTGTTGATCCTATCAATGACCCTCCATTTATTAGAGCCCCCTACTTCATCATATTGAGGAGTAATGAAGATGAGACCCTTATCTTTGACCAAGAGAAAGATAAGTTTGACTTTTTCATTGGAGATCCCGATCTTCTTACCTTCCCTGGTGGTCAGGCTCACTTTTTTGTGACGTTCTCCATGGAAGTAAATGATGGATGGTTGGTGACAAACCTACCAGTTCATTTGATCAATACAACGGAATTGAAGCATGGAATTAATTATCAGTGGCAGCCTCTTCAGACATATGTTACTATCTCAGAGCACTTTATGGTCAAAGCTCATGGAATCAGATTTCAGGCCACAGTCAATGACTGCAACAGTGTTATGCAGCAACTGTTCTATCATGGAGGTGAGCATGGAGCTGTTTTAACAATGACATTAAATGACATGGGAAACTACGGATGTTTTCCAGATTGTGCAGATGGCATGTCAATGCCATTATACACAGAAGCTACTGTAAATTTAATGAGAAAACAACCAATGAGTTCATTTCTGGCTCACACCTTAGGATCAATCATTGTCATTGAATTTGTTATCATTTTCTCTCTTGGAGCCTTGCTTCTTTACTTCACCTGTAAATGTGCTATTCTTCTTGCACATGAAAGAAGAAACAGAGAAGAAAGTTCTTCAGAGTTATCTAATTCCAAGAGTTTCCCCAGAGAAACTGTAGACATGGAAAAGTTAAAGGAGAAAATGGTTAATGATTTCTTTGCAGAAATAGTGTTTCCTGTTCAGTTAAGTTTACTCTCTTCAGTGATTCAGTAA 3282 0.3818 MEILARTLIAISLCALSFFSVYCSQYLTSDRSQLPLFAFSWWDDKGTFQAGDTATIKVKVLENADKIDKKVFNPTLTVNGKEGNSSYVSTVLSDFEGDPNEWKIFFTPIRVGLFNVLISEERYKVDDSSLHFQVEPGNMYPSVCVASWKGVRHEYEAGSKATLMVLLKDAFGNGISKTTQVSYLPDFKLSVLHENGAVASAPDIFNMGWTEFDYIVIEFIVTKAGKFSLSLEGGNQTLKGSPLPLKVNPGAIDVSNCIAKWNVASHAWQLSSKMEIFIHQLDKYGNLVSGLYPFDSEVVETDTNLSIPISDLHFQEVDAGIQLFSFSNFEPGNFLLTIYDSKHNKSISNMPYVYTVFIGYCDGVKSVVNGSGLNDSVAGVKEELSVYLNDIYQYPSPVQANILQVQISIENDSYRVIPVIYPVLDNNGSRIASGLRYDGIGHMETVPSSSIVLRNNSNGSGSFIMASDFRVDYIPEKSGFYDINVYCGNILLNEGHSFRKEVKAGEVNVSLSSVTSFSPKVPKLSKNEIIVQLVDSYLNPVLSQQSRLKLEIASVNSSGFSTLDITDNKDGSYSCSYMAKDVGTYEICASFDGKSFLSCPFSINVYSSEYFPKANNDTISIWEDQSVAFDVLTNDYFAGDNASIVEFSKSDHGSLIQNGRIFRYTPYKGYYGNDSFWYTISDINGNLASASVCIFVLNVPPQFVSAPNQLQATEDSISPRFGGFTGFEITYSNPMENISVNLSAQSGIVLLSPMAMQFGQVMWSELTFDTGNETATSLIIEGSVEVINFALQSIQYLGNENFYGGDTIQVSTRNKNGVNSLGVPIFVDPINDPPFIRAPYFIILRSNEDETLIFDQEKDKFDFFIGDPDLLTFPGGQAHFFVTFSMEVNDGWLVTNLPVHLINTTELKHGINYQWQPLQTYVTISEHFMVKAHGIRFQATVNDCNSVMQQLFYHGGEHGAVLTMTLNDMGNYGCFPDCADGMSMPLYTEATVNLMRKQPMSSFLAHTLGSIIVIEFVIIFSLGALLLYFTCKCAILLAHERRNREESSSELSNSKSFPRETVDMEKLKEKMVNDFFAEIVFPVQLSLLSSVIQ 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00116 1093 SMART flmn_3 508 608 IPR001298 GO:0005515
Vian4g00116 1093 SUPERFAMILY E set domains 527 608 IPR014756 -
Vian4g00116 1093 Gene3D Immunoglobulins 508 607 IPR013783 -
Vian4g00116 1093 Gene3D Immunoglobulins 138 255 IPR013783 -
Vian4g00116 1093 Pfam Filamin/ABP280 repeat 523 601 IPR017868 -
Vian4g00116 1093 Pfam Filamin/ABP280 repeat 360 489 IPR017868 -
Vian4g00116 1093 Pfam Bacterial Ig domain 602 685 - -
Vian4g00116 1093 ProSiteProfiles Filamin/ABP280 repeat profile. 506 605 IPR017868 -
Vian4g00116 1093 Gene3D Immunoglobulins 353 507 IPR013783 -
Vian4g00116 1093 SUPERFAMILY E set domains 140 257 IPR014756 -
Vian4g00116 1093 Gene3D - 608 693 - -
Vian4g00116 1093 PANTHER JITTERBUG, ISOFORM N 761 1083 IPR044801 GO:0030036|GO:0051015
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00116 - - gmx:100786794 1768.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00116 4 1065053 1071872 Vian4g00116 4 1065053 1071872 ECH