Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00113 ATGACTAAGAGTACCTTGGAACCCGGGGGGAGTGGAGGCGGTGGCTTCCACGCGGTTCACGCGGAGCGTGACCTAGAATCTAATTGGGAAGTTGACCTCGCCAAAAAACTCGAGGAGTATTTGCTGAAAATTTGTTCAGGGGAGATCACCGGCGAGGAAGAAGGACATATTCCTGTGAACTTTGCCGAAGCTGCTCTACTGCTTCAGGGTTCCATACAGGTCTATAGTCGAAAGGTGGAGTATCTCTACACCTTGGTCTTGCGTGCTTTGGAGTTCCTTTCCCAGAAAAGACAGCAAGATCATGAAGATGGGGAATCGGTCCAACCTGAAGAAATGGGTTCCCGTGCTGTTGCTGATGAGGAAAATGATCAATTCTGGGGCTTAGATGGCATCCAAGTTGAAGAAAATAATTCCTTGGATGGCACAACTGGCAAAGAAGTAAATTTGGATCACTTTATAAAACCTCCTGCAAATCTAGTTGTTCTTGAAGGTGACTGCTTGGATGCTGGTGGTGATGGAGGAGAATTGGAGTCTTTTCTGTTGTCCACCACAGACCTATACCAGGACTTCATCTTATTGGACACATCTGATGCTGTTGCAGTTCATGAGTTTTTGGAGGGTACCAAAGCTGCCAAAACTCGAAATGATGCTAGTAGAAGAACCCCAGGTCGTAAAAGCTTTCTTTCTCCTGGACGTTCTGGTGGAAGTGCTCGTAGATTATCTGCTGCTAAGAGTCAGTGTGCGAATTCCAACTGCTCCCCTAAACTTAATAGTGGTTTTGATGATGAAAATGTCCGGCCCAGTTTTCCTGCTTCTGATGGTCTTGATGACTGCAATTATGGATTTGATATGGGTCAGGGATGTGAGGCATCTAGGGATTCAGACAATTCAGATGACGATAATGATGATCCATGGAAACCTCTAAATCCTCATGAACAGGGCAACTTGAGGGTGAAGCCATTCAGAAAAGTGAAAATTTTAAAAAAGAGTAACATTAATGTGAGACAACCAGTTCCTATGAGCTCCTTGTTTCCAGTTGCAAAATTGCATGGCCCTATCAGTCCAGAGCTCGTGGAACTGTGGGAGAGGCAACATAATGCCCATGAAAGACAAAGGGATTTTCAAGCTCCATTCTATGAGAAGCTGAGGCAGTCTCTTGTTAACGAGGGGAATGAAACTGGTGTAACATTTAACACTGAAGGGGACAATGATGACATTGAACATGACAGTGGAATTCCTGATTTTGATATGCCAGACAATGCTTTCATGGAAGAAAATCTAGCACCTTTCAATAACGAGCCTGAGTTTGATGATGCTGATGTCAATGTTGATGAAGCCGTAGATCTTTCTCAGGCAAGTTTGGAAGATCTTTGCCGCTCTCATCTGAATGCTCTCCTAGCAAGCATTGCTGAAACTGAGAAGCAGACTGAAATGGCTGCTAGGGTTTCAACGTGGAAACAAAGAATTGAACATAATTTGGAAGAACAGGAATCACATCCACCATTTGATATCCAAGATTATGGTGAGAGAATTCTTGACAAGTTCTCTCTGCTCTCCCTTGAAGCAAGCAGTAGCCGTGTCCTGTCCTTTTCTGATTTGGTCAAGGGTCAGGAAAAGTATGACGTGGCCCGAAGTTTTTCTTCCCTTCTTCAACTGGTAAACAATGGAGAAGTAGCTCTAGAAAGAAATGGAATTGATGGGAAATCTGTCTGCTACACATCTGTTAATCCCTTTCATGTTAAGCTCCTTAAGCATGGTAAGGAACGGGAGGATGCACAGTTTGCTTTGCCAAAAAAGAGAGCAAAGTCTCCAAAAACACCCTCTACAAAAGGACATAAGAACAAATTTGAAAGAGAAAAATCTCCCACATCTTCTAGGAGAAATGGATCTACTGGTGTGTCACCACCAGCAAATTGTAAACTTTCTGTAAAGCTTGGAAAGGTGAGTGCGATAAAGGTATCCCCTGAAGCCAAAAGAAGGCGTAGATCACAGTATGTTGAACCAGTTAATTTACATTCAGCAGGGTGA 2028 0.4364 MTKSTLEPGGSGGGGFHAVHAERDLESNWEVDLAKKLEEYLLKICSGEITGEEEGHIPVNFAEAALLLQGSIQVYSRKVEYLYTLVLRALEFLSQKRQQDHEDGESVQPEEMGSRAVADEENDQFWGLDGIQVEENNSLDGTTGKEVNLDHFIKPPANLVVLEGDCLDAGGDGGELESFLLSTTDLYQDFILLDTSDAVAVHEFLEGTKAAKTRNDASRRTPGRKSFLSPGRSGGSARRLSAAKSQCANSNCSPKLNSGFDDENVRPSFPASDGLDDCNYGFDMGQGCEASRDSDNSDDDNDDPWKPLNPHEQGNLRVKPFRKVKILKKSNINVRQPVPMSSLFPVAKLHGPISPELVELWERQHNAHERQRDFQAPFYEKLRQSLVNEGNETGVTFNTEGDNDDIEHDSGIPDFDMPDNAFMEENLAPFNNEPEFDDADVNVDEAVDLSQASLEDLCRSHLNALLASIAETEKQTEMAARVSTWKQRIEHNLEEQESHPPFDIQDYGERILDKFSLLSLEASSSRVLSFSDLVKGQEKYDVARSFSSLLQLVNNGEVALERNGIDGKSVCYTSVNPFHVKLLKHGKEREDAQFALPKKRAKSPKTPSTKGHKNKFEREKSPTSSRRNGSTGVSPPANCKLSVKLGKVSAIKVSPEAKRRRRSQYVEPVNLHSAG 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00113 675 MobiDBLite consensus disorder prediction 610 624 - -
Vian4g00113 675 Pfam Condensin II complex subunit CAP-H2 or CNDH2, N-terminal 17 131 IPR009378 -
Vian4g00113 675 MobiDBLite consensus disorder prediction 286 316 - -
Vian4g00113 675 Pfam Condensin II complex subunit CAP-H2 or CNDH2, C-term 304 591 IPR031737 -
Vian4g00113 675 PANTHER CONDENSIN-2 COMPLEX SUBUNIT H2 15 669 IPR031739 GO:0030261
Vian4g00113 675 Gene3D Structural maintenance of chromosome 1. Chain E 503 567 IPR023093 -
Vian4g00113 675 MobiDBLite consensus disorder prediction 212 240 - -
Vian4g00113 675 MobiDBLite consensus disorder prediction 594 675 - -
Vian4g00113 675 Pfam Condensin II complex subunit CAP-H2 or CNDH2, mid domain 154 300 IPR031719 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00113 K11490 - gmx:100786571 1079.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00113 4 1046914 1052313 Vian4g00113 4 1046914 1052313 ECH