Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian4g00112 ATGTCAAACACCACAAGCCAAATAACAGACCTTGTAGCGCAACTCGATGTTGCTAATCACTTTCCCTACGACTCTCTCCTCGGCTACTGCTCTTCCAACATTTCGGGTTTCCCTCAACCCGCTACTCAGTTCACCGTTTCGCAGTTTGGGCATGGACAATCCAACCCCACTTACTTGTTGGAAGCGGGTTCTCATGACTCCGTCGTGAAGCGCTATGTTCTCAGGAAGAAACCTGCCGGGAAATTGCTCGCCTCAGCTCATGCCGTTGAAAGAGAATTTCAGGTTCTCCAGGCATTGGGTGCTCATACCAAAGTTCCGGTTCCTAAGGTTTTCTGTTTGTGCAACGATCCAAGTGTTATTGGAACCGCGTTTTATATCATGGAATATTTGGAGGGACGCATATTTATTGACTCTAAGTTACCGGGTGTGCCACCTGAGAGGAGGAGCGCAATTTACAGGGCAACTGCTAAAGCCTTAGCTTCCATACATTCTGCTAATGTGGACTCCATTGGTTTGGGAAAATATGGACAACGCAATAATTATTGCAAAAGACAGATTGAGAGGTGGGCTAAGCAATATGTTGCCTCAACCAGTGAGGGTAAACCTGCAAGTAATCCAAAAATGTTTGCCTTGATTGATTGGCTACGACATCAAATCCCCTCTGAAGATTCTTCAGGAGCAACAGGTGGTCTGGTTCATGGAGATTTTCGCATTGACAATCTTGTGTTCCATCCCACAGAGGATCGAGTAATTGGAATACTTGACTGGGAACTGTCTACCCTCGGTAACCAAATGTGTGATGTTGCATATAGCTGTATGACTTATATTGCAGATATTGGGCCTGAAAACGTGCATGAAGGTATGGAGCGTTCTGGACTACCTGAGGGGATTCCTTCACTACCCGAATATTTGGCTGATTACTGTTCCCTAGCAGAAAGAAAATGGCCTGTTGCTGAATGGAAGTTCTATATTGCCTTTTCTTTGTTCAGAGGCGCTTCAATTTATGCAGGAGTTTATAATAGATGGGTTAAGGGTAATGCATCAGGAGGTGAGCGTGCTCGATACACTGGAGTACTTGCTAATGGCCTTATAGATGCTGCTTGGGAATTTATTGGACAAAATTCCGTGCTTCCTCAGCATCCTCCTTCAGATGCAAATGGACGAGAATATTCAAAAGAGTTTGTGAATGGGAATGATGCACAGGGCCGCTCAAATCAGGGGAAGTTTGTTCCTAGTCAAAAGGTTTTGGAACTGAGGAAAAAATTAATTAAGTTCATGGAGGAACACATTTACCCCATGGAAAATGAATTTTATGAACTTGCCCAATCAGACTCACGCTGGACTGTTCACCCAGCAGAGGAAAAGTTAAAGGAGATGGCAAAGAAAGAAGGCTTGTGGAACTTATGGATTCCTCTTGATAGTGCAGTGAGAGCAAGAAGCCTTATCTTTGATGGGAGCAATAATCATCTCTCTTCCAATGCAAATGATTTGTTATTGGGGGCTGGTCTCACTAATCTCGAATACGGATACCTTTGTGAGATCATGGGTCGTTCCATTTGGGCTCCACAAATATTTAATTGTGGTGCACCTGACACAGGTAATATGGAGGTATTACTGCGTTATGGAAATAAAGAACAACTGCAAGAATGGCTAGTTCCTTTGCTTGAGGGGACAATTAGGTCTGGATTTGCTATGACGGAACCACAGGTTGCATCTTCTGATGCAACCAATATTGAGTGTTCTATTAAAAGGCAAGGAGATTCATATATTATCAATGGGACAAAATGGTGGACAAGTGGTGCTATGGATCCAAGATGTAGAATTCTTATAGTCATGGGGAAAACTGACTTCAATGCAGCTAAGCATAAACAACAATCGATGATCTTAGTGGATGTCCAGACTCCTGGTGTTCACATAAAGAGACCATTGACGGTGTTTGGCTTTGATGATGCTCCTCATGGGCATGCAGAAATAACTTTTGAAAATGTTTGTGTGCCAGCGAAAAACATCCTACTGGGGGAAGGACGTGGATTTGAGATTGCTCAGGGTAGGCTTGGTCCTGGAAGGCTGCACCATTGTATGAGACTGATAGGTGTTGCTGAGCGCGGCATGCAGTTGATGGTTCAAAGAGCCATCAGTAGAAAAACATTTGGAAAGTACATTGCTCAACATGGTTCATTTCTCTCAGATATGGCCAAGTGCCGAATAGAGGTAGAGAGGACCAGATTGTTAGTGTTGGAAGCCGCTGACCAACTTGATAGGCTTGGGAACAAAAATGCTCGGGGGATACTAGCAATGGCAAAGGTAGCTGCACCGAACATGGCACTGAAGGTGCTTGACATGGCAATGCAAGTGCATGGAGCAGCTGGTGTTTCATCTGAAACCGTTCTTGCTCATCTCTGGGCAGCTTCAAGGACACTGAGAATCGCTGATGGTCCAGATGAAGTTCACTTGGGGACCATTGCCAAGCTAGAACTGCAGAAAGCCAAGCTTTGA 2496 0.4451 MSNTTSQITDLVAQLDVANHFPYDSLLGYCSSNISGFPQPATQFTVSQFGHGQSNPTYLLEAGSHDSVVKRYVLRKKPAGKLLASAHAVEREFQVLQALGAHTKVPVPKVFCLCNDPSVIGTAFYIMEYLEGRIFIDSKLPGVPPERRSAIYRATAKALASIHSANVDSIGLGKYGQRNNYCKRQIERWAKQYVASTSEGKPASNPKMFALIDWLRHQIPSEDSSGATGGLVHGDFRIDNLVFHPTEDRVIGILDWELSTLGNQMCDVAYSCMTYIADIGPENVHEGMERSGLPEGIPSLPEYLADYCSLAERKWPVAEWKFYIAFSLFRGASIYAGVYNRWVKGNASGGERARYTGVLANGLIDAAWEFIGQNSVLPQHPPSDANGREYSKEFVNGNDAQGRSNQGKFVPSQKVLELRKKLIKFMEEHIYPMENEFYELAQSDSRWTVHPAEEKLKEMAKKEGLWNLWIPLDSAVRARSLIFDGSNNHLSSNANDLLLGAGLTNLEYGYLCEIMGRSIWAPQIFNCGAPDTGNMEVLLRYGNKEQLQEWLVPLLEGTIRSGFAMTEPQVASSDATNIECSIKRQGDSYIINGTKWWTSGAMDPRCRILIVMGKTDFNAAKHKQQSMILVDVQTPGVHIKRPLTVFGFDDAPHGHAEITFENVCVPAKNILLGEGRGFEIAQGRLGPGRLHHCMRLIGVAERGMQLMVQRAISRKTFGKYIAQHGSFLSDMAKCRIEVERTRLLVLEAADQLDRLGNKNARGILAMAKVAAPNMALKVLDMAMQVHGAAGVSSETVLAHLWAASRTLRIADGPDEVHLGTIAKLELQKAKL 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian4g00112 831 Gene3D - 676 830 - -
Vian4g00112 831 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 673 827 IPR036250 GO:0016627
Vian4g00112 831 Gene3D - 132 375 - -
Vian4g00112 831 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 409 688 IPR009100 GO:0016627
Vian4g00112 831 Gene3D Phosphorylase Kinase; domain 1 24 131 - -
Vian4g00112 831 PANTHER MEDIUM-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE, MITOCHONDRIAL-RELATED 84 828 - -
Vian4g00112 831 SUPERFAMILY Protein kinase-like (PK-like) 43 346 IPR011009 -
Vian4g00112 831 FunFam Acyl-CoA dehydrogenase fadE12 561 679 - -
Vian4g00112 831 Pfam Phosphotransferase enzyme family 46 292 IPR002575 -
Vian4g00112 831 Pfam Acyl-CoA dehydrogenase, middle domain 562 663 IPR006091 GO:0016627
Vian4g00112 831 CDD ACAD10_11_N-like 45 311 IPR041726 -
Vian4g00112 831 Gene3D - 410 559 IPR037069 GO:0016627|GO:0050660
Vian4g00112 831 Gene3D - 561 675 IPR046373 GO:0016627
Vian4g00112 831 Pfam Acyl-CoA dehydrogenase, C-terminal domain 675 823 IPR009075 GO:0016627
Vian4g00112 831 Pfam Acyl-CoA dehydrogenase, N-terminal domain 417 557 IPR013786 GO:0016627|GO:0050660
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian4g00112 6 829 Acyl Lipid Metabolism Gene Families AT3G06810 75.333 0.0 1308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian4g00112 K00249 - gmx:100788184 1509.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian4g00112 4 1029178 1041945 Vian4g00112 4 1029178 1041945 ECH