Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02624 ATGACACCTTCAATTCTTGGTGGTGAATCCAGGGTCGATAGAACTAACACTTACTCCTTAATTCCCGTTTCCCACGACGAAGATGAGAACGAGGTATCATGTAACTGTGAGGAGTTCTGTGGAACTCCTTGGAGAATTGTTAGAACATTTGTGGGTTTGGTTGCAGTTGTTGTTCTGTTCGTAATTGTTGTCATAAACGAACACAACATCAGCAAAATGTCACATATCAGCCCACCAAAGTTTTTCATTCATTCTCTGCGTGTTTCCACGTTCAAAATCTCTCAAGGAGAATTATCAGCGACGTGGAACGTGGACTTAGCCATCTCCAACGAGGTGAACTCAACGTTCATAAACTTTTTGAACTTGAAGGCCATGATTGTGTACAAGGAAGACATACCTATAGCACTGAGTTCCCCGATTCAACCGGAGAATTTATTGGACACGCATGGGATTTTCTCCATCAGTATGAATGAGAAGAAGATGTTGCATTTGAGTTTCAACACTACTGGGTGGGAGAAAGATCAACCGGTGGTGGATGATGATGTGATTCAAGAGATTGATGAACAGATGAAAGTGGGTGTTATAAGCTTTGGATTGAAGATAGATGTGGAAGCTGAAGTGGAACTTAACATGATGAATGTGCCCTTGACCATGGAACCTTATTGTTCCAATTTGGAAGTTGATTTTGCACCGTTGGAACGAGGTGAGGCAGCGACAACATTGGACAATATCGATGTTGATGAGGTGAAAGAGTGCTTCAACAACGTAGATCAATTGAACGATTTAGGCCAAGAAAGAGAATCATCACCGCTTTCCACTAACTTTCCCTCGGGAAAATCCATGGACCACCCACCACCTCCACCAACCACCACATACCCAACCCATCCACCACCGCCAATGTATTACCCGAATCCTCATGCATACCCCCACCCATATCCTAATGCTTACCCTCCCGGTTACCATTACCCTGCACCCGCCCCTTACTATGGTCCCCCTCCCCCCTACGAAAGAAGATCTTCTTCATCTTGTGCTCGCTGCTGTAGAAGCTTCTTCATGTGTTGCTTGCTCCTCCTCACCATCTCCTTTCTCATGAGCCTCTTTCTAGCTTTGGCGCTACATCCACAACTACCTGAGTACAAGGTTGTTTCCTTGTCTGTTACAAACCTTACAACCCAACCAACCCTAGGTGGTCAATTTGACACCAAAATTTCCATTGAAAACCCTAACGACAAACTTGTCGGTTATTTCTCCGACTTTAAGGTTTTCATGTCGTACAAGGATGGAGTGGTTGCGGCTGATGCTGCGCCCGGACTTTCGTTGAATACGAAGTCTCAAACAGAGGTGATCGTAAGGGGTTTGTTCAACCAAGGGAACAGATTGGAACCGAAACTAATGGATGATTTGGTCAAAGAACGAGGTACAGACTCCGTTACCTTCAGTTTGAGGATGTCTTCCTTGATCGTTCTTAAGTCTCATACGTTTACCACGAAGAGTGAAGAGCTTCTTGCAATTTGTGATGGGTTGAAGGTGAAGTTTCAAGATAATAGTATACCACTTCTGGAGAATTGGACAACAACGGAAAACCCGTCCCATGCATGCTATATATTTGAAGTGGGTCATAATCTATAA 1629 0.4414 MTPSILGGESRVDRTNTYSLIPVSHDEDENEVSCNCEEFCGTPWRIVRTFVGLVAVVVLFVIVVINEHNISKMSHISPPKFFIHSLRVSTFKISQGELSATWNVDLAISNEVNSTFINFLNLKAMIVYKEDIPIALSSPIQPENLLDTHGIFSISMNEKKMLHLSFNTTGWEKDQPVVDDDVIQEIDEQMKVGVISFGLKIDVEAEVELNMMNVPLTMEPYCSNLEVDFAPLERGEAATTLDNIDVDEVKECFNNVDQLNDLGQERESSPLSTNFPSGKSMDHPPPPPTTTYPTHPPPPMYYPNPHAYPHPYPNAYPPGYHYPAPAPYYGPPPPYERRSSSSCARCCRSFFMCCLLLLTISFLMSLFLALALHPQLPEYKVVSLSVTNLTTQPTLGGQFDTKISIENPNDKLVGYFSDFKVFMSYKDGVVAADAAPGLSLNTKSQTEVIVRGLFNQGNRLEPKLMDDLVKERGTDSVTFSLRMSSLIVLKSHTFTTKSEELLAICDGLKVKFQDNSIPLLENWTTTENPSHACYIFEVGHNL 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02624 542 MobiDBLite consensus disorder prediction 260 297 - -
Vian3g02624 542 MobiDBLite consensus disorder prediction 280 297 - -
Vian3g02624 542 MobiDBLite consensus disorder prediction 260 279 - -
Vian3g02624 542 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 288 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02624 Vian-Chr3 40755795 40760052 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02624 - - vum:124823497 347.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02553 2 46176472 46177335 Vian3g02624 3 40755795 40760052 PCT